RNA–Protein interactions for RNA: ENST00000403750.5

PPARGC1B-204, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PPARGC1B, Length 3,146 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-204ENST00000403750 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
PPARGC1B-204ENST00000403750 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
PPARGC1B-204ENST00000403750 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
PPARGC1B-204ENST00000403750 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
PPARGC1B-204ENST00000403750 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
PPARGC1B-204ENST00000403750 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
PPARGC1B-204ENST00000403750 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
PPARGC1B-204ENST00000403750 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.69
PPARGC1B-204ENST00000403750 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
PPARGC1B-204ENST00000403750 HRCP23327 699 aa19.14■□□□□ 0.66
PPARGC1B-204ENST00000403750 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
PPARGC1B-204ENST00000403750 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
PPARGC1B-204ENST00000403750 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
PPARGC1B-204ENST00000403750 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.61
PPARGC1B-204ENST00000403750 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
PPARGC1B-204ENST00000403750 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
PPARGC1B-204ENST00000403750 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
PPARGC1B-204ENST00000403750 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
PPARGC1B-204ENST00000403750 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
PPARGC1B-204ENST00000403750 ABCC9O60706 1549 aa18.34■□□□□ 0.53
PPARGC1B-204ENST00000403750 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.52
PPARGC1B-204ENST00000403750 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
PPARGC1B-204ENST00000403750 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
PPARGC1B-204ENST00000403750 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
PPARGC1B-204ENST00000403750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
PPARGC1B-204ENST00000403750 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
PPARGC1B-204ENST00000403750 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
PPARGC1B-204ENST00000403750 WIZO95785 1651 aa17.97■□□□□ 0.47
PPARGC1B-204ENST00000403750 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
PPARGC1B-204ENST00000403750 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
PPARGC1B-204ENST00000403750 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
PPARGC1B-204ENST00000403750 NACADO15069 1562 aa17.81■□□□□ 0.44
PPARGC1B-204ENST00000403750 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
PPARGC1B-204ENST00000403750 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
PPARGC1B-204ENST00000403750 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
PPARGC1B-204ENST00000403750 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
PPARGC1B-204ENST00000403750 SOGA1O94964 1423 aa17.69■□□□□ 0.42
PPARGC1B-204ENST00000403750 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
PPARGC1B-204ENST00000403750 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
PPARGC1B-204ENST00000403750 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
PPARGC1B-204ENST00000403750 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
PPARGC1B-204ENST00000403750 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
PPARGC1B-204ENST00000403750 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
PPARGC1B-204ENST00000403750 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
PPARGC1B-204ENST00000403750 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
PPARGC1B-204ENST00000403750 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
PPARGC1B-204ENST00000403750 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
PPARGC1B-204ENST00000403750 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
PPARGC1B-204ENST00000403750 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
PPARGC1B-204ENST00000403750 SMARCA2P51531 1590 aa17.46■□□□□ 0.38
PPARGC1B-204ENST00000403750 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.38
PPARGC1B-204ENST00000403750 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
PPARGC1B-204ENST00000403750 APLP2Q06481 763 aa17.43■□□□□ 0.38
PPARGC1B-204ENST00000403750 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
PPARGC1B-204ENST00000403750 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
PPARGC1B-204ENST00000403750 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
PPARGC1B-204ENST00000403750 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
PPARGC1B-204ENST00000403750 MIER1Q8N108 512 aa17.32■□□□□ 0.36
PPARGC1B-204ENST00000403750 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
PPARGC1B-204ENST00000403750 CLIP1P30622 1438 aa17.27■□□□□ 0.36
PPARGC1B-204ENST00000403750 ITGAEP38570 1179 aa17.25■□□□□ 0.35
PPARGC1B-204ENST00000403750 EEA1Q15075 1411 aa17.24■□□□□ 0.35
PPARGC1B-204ENST00000403750 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
PPARGC1B-204ENST00000403750 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
PPARGC1B-204ENST00000403750 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
PPARGC1B-204ENST00000403750 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
PPARGC1B-204ENST00000403750 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
PPARGC1B-204ENST00000403750 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
PPARGC1B-204ENST00000403750 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
PPARGC1B-204ENST00000403750 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
PPARGC1B-204ENST00000403750 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
PPARGC1B-204ENST00000403750 KIF21BO75037 1637 aa16.98■□□□□ 0.31
PPARGC1B-204ENST00000403750 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
PPARGC1B-204ENST00000403750 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
PPARGC1B-204ENST00000403750 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
PPARGC1B-204ENST00000403750 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
PPARGC1B-204ENST00000403750 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
PPARGC1B-204ENST00000403750 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
PPARGC1B-204ENST00000403750 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
PPARGC1B-204ENST00000403750 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
PPARGC1B-204ENST00000403750 BCANQ96GW7 911 aa16.79■□□□□ 0.28
PPARGC1B-204ENST00000403750 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
PPARGC1B-204ENST00000403750 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
PPARGC1B-204ENST00000403750 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
PPARGC1B-204ENST00000403750 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
PPARGC1B-204ENST00000403750 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
PPARGC1B-204ENST00000403750 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
PPARGC1B-204ENST00000403750 CUX1P39880 1505 aa16.74■□□□□ 0.27
PPARGC1B-204ENST00000403750 RAB3GAP2Q9H2M9 1393 aa16.7■□□□□ 0.26
PPARGC1B-204ENST00000403750 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
PPARGC1B-204ENST00000403750 CUX2O14529 1486 aa16.69■□□□□ 0.26
PPARGC1B-204ENST00000403750 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
PPARGC1B-204ENST00000403750 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
PPARGC1B-204ENST00000403750 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
PPARGC1B-204ENST00000403750 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
PPARGC1B-204ENST00000403750 IGF1RP08069 1367 aa16.61■□□□□ 0.25
PPARGC1B-204ENST00000403750 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
PPARGC1B-204ENST00000403750 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
PPARGC1B-204ENST00000403750 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
PPARGC1B-204ENST00000403750 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms