RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 NISCHQ9Y2I1 1504 aa23.11■■□□□ 1.29
ATP2A1-202ENST00000395503 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
ATP2A1-202ENST00000395503 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
ATP2A1-202ENST00000395503 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
ATP2A1-202ENST00000395503 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
ATP2A1-202ENST00000395503 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
ATP2A1-202ENST00000395503 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
ATP2A1-202ENST00000395503 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
ATP2A1-202ENST00000395503 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
ATP2A1-202ENST00000395503 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
ATP2A1-202ENST00000395503 HRCP23327 699 aa19.12■□□□□ 0.65
ATP2A1-202ENST00000395503 PPARGC1BQ86YN6 1023 aaKnown RBP19.05■□□□□ 0.64
ATP2A1-202ENST00000395503 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
ATP2A1-202ENST00000395503 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
ATP2A1-202ENST00000395503 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
ATP2A1-202ENST00000395503 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
ATP2A1-202ENST00000395503 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
ATP2A1-202ENST00000395503 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
ATP2A1-202ENST00000395503 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
ATP2A1-202ENST00000395503 ABCC9O60706 1549 aa18.4■□□□□ 0.54
ATP2A1-202ENST00000395503 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
ATP2A1-202ENST00000395503 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
ATP2A1-202ENST00000395503 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
ATP2A1-202ENST00000395503 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
ATP2A1-202ENST00000395503 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
ATP2A1-202ENST00000395503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
ATP2A1-202ENST00000395503 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
ATP2A1-202ENST00000395503 WIZO95785 1651 aa18■□□□□ 0.47
ATP2A1-202ENST00000395503 NACADO15069 1562 aa17.9■□□□□ 0.46
ATP2A1-202ENST00000395503 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
ATP2A1-202ENST00000395503 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
ATP2A1-202ENST00000395503 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
ATP2A1-202ENST00000395503 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
ATP2A1-202ENST00000395503 RANGAP1P46060 587 aaPredicted RBP17.79■□□□□ 0.44
ATP2A1-202ENST00000395503 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.43
ATP2A1-202ENST00000395503 SOGA1O94964 1423 aa17.73■□□□□ 0.43
ATP2A1-202ENST00000395503 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
ATP2A1-202ENST00000395503 DIEXFQ68CQ4 756 aaKnown RBP17.66■□□□□ 0.42
ATP2A1-202ENST00000395503 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
ATP2A1-202ENST00000395503 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
ATP2A1-202ENST00000395503 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
ATP2A1-202ENST00000395503 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
ATP2A1-202ENST00000395503 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
ATP2A1-202ENST00000395503 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
ATP2A1-202ENST00000395503 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
ATP2A1-202ENST00000395503 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
ATP2A1-202ENST00000395503 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
ATP2A1-202ENST00000395503 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
ATP2A1-202ENST00000395503 SMARCA2P51531 1590 aa17.52■□□□□ 0.39
ATP2A1-202ENST00000395503 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
ATP2A1-202ENST00000395503 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
ATP2A1-202ENST00000395503 CENPBP07199 599 aaPredicted RBP17.43■□□□□ 0.38
ATP2A1-202ENST00000395503 APLP2Q06481 763 aa17.42■□□□□ 0.38
ATP2A1-202ENST00000395503 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
ATP2A1-202ENST00000395503 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
ATP2A1-202ENST00000395503 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
ATP2A1-202ENST00000395503 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
ATP2A1-202ENST00000395503 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
ATP2A1-202ENST00000395503 CLIP1P30622 1438 aa17.3■□□□□ 0.36
ATP2A1-202ENST00000395503 EEA1Q15075 1411 aa17.3■□□□□ 0.36
ATP2A1-202ENST00000395503 MIER1Q8N108 512 aa17.3■□□□□ 0.36
ATP2A1-202ENST00000395503 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
ATP2A1-202ENST00000395503 ITGAEP38570 1179 aa17.22■□□□□ 0.35
ATP2A1-202ENST00000395503 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
ATP2A1-202ENST00000395503 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
ATP2A1-202ENST00000395503 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
ATP2A1-202ENST00000395503 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
ATP2A1-202ENST00000395503 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
ATP2A1-202ENST00000395503 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
ATP2A1-202ENST00000395503 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
ATP2A1-202ENST00000395503 KIF21BO75037 1637 aa17.02■□□□□ 0.32
ATP2A1-202ENST00000395503 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
ATP2A1-202ENST00000395503 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
ATP2A1-202ENST00000395503 P3H3Q8IVL6 736 aa16.95■□□□□ 0.3
ATP2A1-202ENST00000395503 DHX57Q6P158 1386 aaKnown RBP16.92■□□□□ 0.3
ATP2A1-202ENST00000395503 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
ATP2A1-202ENST00000395503 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
ATP2A1-202ENST00000395503 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
ATP2A1-202ENST00000395503 KIF27Q86VH2 1401 aa16.83■□□□□ 0.29
ATP2A1-202ENST00000395503 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
ATP2A1-202ENST00000395503 KCNH8Q96L42 1107 aa16.82■□□□□ 0.28
ATP2A1-202ENST00000395503 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
ATP2A1-202ENST00000395503 CUX1P39880 1505 aa16.8■□□□□ 0.28
ATP2A1-202ENST00000395503 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
ATP2A1-202ENST00000395503 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
ATP2A1-202ENST00000395503 CUX2O14529 1486 aa16.73■□□□□ 0.27
ATP2A1-202ENST00000395503 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
ATP2A1-202ENST00000395503 BCANQ96GW7 911 aa16.73■□□□□ 0.27
ATP2A1-202ENST00000395503 DDX10Q13206 875 aaKnown RBP16.73■□□□□ 0.27
ATP2A1-202ENST00000395503 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
ATP2A1-202ENST00000395503 RAB3GAP2Q9H2M9 1393 aa16.72■□□□□ 0.27
ATP2A1-202ENST00000395503 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
ATP2A1-202ENST00000395503 SUPT16HQ9Y5B9 1047 aaKnown RBP16.7■□□□□ 0.26
ATP2A1-202ENST00000395503 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
ATP2A1-202ENST00000395503 IGF1RP08069 1367 aa16.68■□□□□ 0.26
ATP2A1-202ENST00000395503 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
ATP2A1-202ENST00000395503 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
ATP2A1-202ENST00000395503 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
ATP2A1-202ENST00000395503 CFTRP13569 1480 aa16.63■□□□□ 0.25
ATP2A1-202ENST00000395503 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms