RNA–Protein interactions for RNA: ENST00000287497.12

ITGAM-201, Transcript of integrin subunit alpha M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGAM, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-201ENST00000287497 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
ITGAM-201ENST00000287497 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
ITGAM-201ENST00000287497 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
ITGAM-201ENST00000287497 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
ITGAM-201ENST00000287497 ABCC9O60706 1549 aa20.29■□□□□ 0.84
ITGAM-201ENST00000287497 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
ITGAM-201ENST00000287497 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
ITGAM-201ENST00000287497 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
ITGAM-201ENST00000287497 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
ITGAM-201ENST00000287497 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
ITGAM-201ENST00000287497 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
ITGAM-201ENST00000287497 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
ITGAM-201ENST00000287497 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
ITGAM-201ENST00000287497 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.67
ITGAM-201ENST00000287497 TRIM41Q8WV44 630 aa19.21■□□□□ 0.67
ITGAM-201ENST00000287497 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
ITGAM-201ENST00000287497 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
ITGAM-201ENST00000287497 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
ITGAM-201ENST00000287497 NACADO15069 1562 aa19.03■□□□□ 0.64
ITGAM-201ENST00000287497 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
ITGAM-201ENST00000287497 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
ITGAM-201ENST00000287497 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
ITGAM-201ENST00000287497 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
ITGAM-201ENST00000287497 PPARGC1BQ86YN6 1023 aaKnown RBP18.89■□□□□ 0.61
ITGAM-201ENST00000287497 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
ITGAM-201ENST00000287497 HRCP23327 699 aa18.69■□□□□ 0.58
ITGAM-201ENST00000287497 WIZO95785 1651 aa18.63■□□□□ 0.57
ITGAM-201ENST00000287497 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
ITGAM-201ENST00000287497 BAZ1AQ9NRL2 1556 aaPredicted RBP18.48■□□□□ 0.55
ITGAM-201ENST00000287497 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
ITGAM-201ENST00000287497 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
ITGAM-201ENST00000287497 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
ITGAM-201ENST00000287497 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
ITGAM-201ENST00000287497 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
ITGAM-201ENST00000287497 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
ITGAM-201ENST00000287497 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
ITGAM-201ENST00000287497 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
ITGAM-201ENST00000287497 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
ITGAM-201ENST00000287497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
ITGAM-201ENST00000287497 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
ITGAM-201ENST00000287497 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
ITGAM-201ENST00000287497 SOGA1O94964 1423 aa18.15■□□□□ 0.5
ITGAM-201ENST00000287497 APLP2Q06481 763 aa18.14■□□□□ 0.49
ITGAM-201ENST00000287497 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
ITGAM-201ENST00000287497 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
ITGAM-201ENST00000287497 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
ITGAM-201ENST00000287497 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
ITGAM-201ENST00000287497 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
ITGAM-201ENST00000287497 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
ITGAM-201ENST00000287497 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
ITGAM-201ENST00000287497 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
ITGAM-201ENST00000287497 ITGAEP38570 1179 aa17.95■□□□□ 0.46
ITGAM-201ENST00000287497 ZEB1P37275 1124 aaPredicted RBP17.92■□□□□ 0.46
ITGAM-201ENST00000287497 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
ITGAM-201ENST00000287497 FBLN2P98095 1184 aa17.79■□□□□ 0.44
ITGAM-201ENST00000287497 CEP162Q5TB80 1403 aa17.78■□□□□ 0.44
ITGAM-201ENST00000287497 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
ITGAM-201ENST00000287497 NESP48681 1621 aa17.73■□□□□ 0.43
ITGAM-201ENST00000287497 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
ITGAM-201ENST00000287497 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.42
ITGAM-201ENST00000287497 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
ITGAM-201ENST00000287497 CLIP1P30622 1438 aa17.66■□□□□ 0.42
ITGAM-201ENST00000287497 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
ITGAM-201ENST00000287497 CUX2O14529 1486 aa17.64■□□□□ 0.41
ITGAM-201ENST00000287497 GOLGA3Q08378 1498 aa17.64■□□□□ 0.41
ITGAM-201ENST00000287497 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
ITGAM-201ENST00000287497 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
ITGAM-201ENST00000287497 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
ITGAM-201ENST00000287497 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
ITGAM-201ENST00000287497 EEA1Q15075 1411 aa17.55■□□□□ 0.4
ITGAM-201ENST00000287497 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
ITGAM-201ENST00000287497 CEP164Q9UPV0 1460 aa17.55■□□□□ 0.4
ITGAM-201ENST00000287497 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
ITGAM-201ENST00000287497 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
ITGAM-201ENST00000287497 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
ITGAM-201ENST00000287497 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
ITGAM-201ENST00000287497 CFTRP13569 1480 aa17.51■□□□□ 0.39
ITGAM-201ENST00000287497 CUX1P39880 1505 aa17.48■□□□□ 0.39
ITGAM-201ENST00000287497 CARMIL1Q5VZK9 1371 aa17.47■□□□□ 0.39
ITGAM-201ENST00000287497 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
ITGAM-201ENST00000287497 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
ITGAM-201ENST00000287497 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
ITGAM-201ENST00000287497 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
ITGAM-201ENST00000287497 IGF1RP08069 1367 aa17.38■□□□□ 0.37
ITGAM-201ENST00000287497 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
ITGAM-201ENST00000287497 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.37
ITGAM-201ENST00000287497 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
ITGAM-201ENST00000287497 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
ITGAM-201ENST00000287497 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
ITGAM-201ENST00000287497 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.36
ITGAM-201ENST00000287497 NEUROD1Q13562 356 aa17.27■□□□□ 0.35
ITGAM-201ENST00000287497 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.35
ITGAM-201ENST00000287497 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
ITGAM-201ENST00000287497 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
ITGAM-201ENST00000287497 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
ITGAM-201ENST00000287497 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
ITGAM-201ENST00000287497 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
ITGAM-201ENST00000287497 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
ITGAM-201ENST00000287497 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
ITGAM-201ENST00000287497 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms