Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIT1Q9Y3P8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SIT1Q9Y3P8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 UNC93B4-201ENST00000505679 747 ntBASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 AP004607.7-201ENST00000527152 1677 ntBASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.74■■□□□ 1.07
SIT1Q9Y3P8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIT1Q9Y3P8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 AC091874.3-201ENST00000512672 1195 ntBASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.72■■□□□ 1.07
SIT1Q9Y3P8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 AC079089.2-201ENST00000531211 1277 ntBASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIT1Q9Y3P8 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.7■■□□□ 1.07
SIT1Q9Y3P8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 EEF1DP3-203ENST00000566025 782 ntBASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 AC053503.5-201ENST00000601508 636 ntBASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.7■■□□□ 1.06
SIT1Q9Y3P8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms