Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 AL592293.1-201ENST00000502889 1188 ntBASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 RAP2CP1-202ENST00000605179 643 ntBASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH1Q9Y2L9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 KRT18P10-201ENST00000388836 1287 ntBASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRCH1Q9Y2L9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRCH1Q9Y2L9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH1Q9Y2L9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRCH1Q9Y2L9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LRCH1Q9Y2L9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.33■□□□□ 0.84
LRCH1Q9Y2L9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 TSPY13P-201ENST00000338964 914 ntBASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRCH1Q9Y2L9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.31■□□□□ 0.84
LRCH1Q9Y2L9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 ATP5G2P3-201ENST00000429083 425 ntBASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 AC129492.7-201ENST00000622992 756 ntBASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH1Q9Y2L9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 AC004987.1-201ENST00000428627 508 ntBASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms