Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 TSPY11P-201ENST00000442607 1045 ntBASIC17.33■□□□□ 0.36
GAR1Q9NY12 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.33■□□□□ 0.36
GAR1Q9NY12 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.33■□□□□ 0.36
GAR1Q9NY12 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAR1Q9NY12 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAR1Q9NY12 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.33■□□□□ 0.36
GAR1Q9NY12 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAR1Q9NY12 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GAR1Q9NY12 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.32■□□□□ 0.36
GAR1Q9NY12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.32■□□□□ 0.36
GAR1Q9NY12 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.32■□□□□ 0.36
GAR1Q9NY12 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 MIR6724-1-201ENST00000616420 92 ntBASIC17.32■□□□□ 0.36
GAR1Q9NY12 MIR6724-2-201ENST00000616483 92 ntBASIC17.32■□□□□ 0.36
GAR1Q9NY12 MIR6724-4-201ENST00000617390 92 ntBASIC17.32■□□□□ 0.36
GAR1Q9NY12 MIR6724-3-201ENST00000622482 92 ntBASIC17.32■□□□□ 0.36
GAR1Q9NY12 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GAR1Q9NY12 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GAR1Q9NY12 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAR1Q9NY12 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 AC242852.2-201ENST00000615738 1807 ntBASIC17.31■□□□□ 0.36
GAR1Q9NY12 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 AC009086.3-201ENST00000623486 1008 ntBASIC17.31■□□□□ 0.36
GAR1Q9NY12 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GAR1Q9NY12 ESRRAP2-201ENST00000418437 1549 ntBASIC17.31■□□□□ 0.36
GAR1Q9NY12 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAR1Q9NY12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.3■□□□□ 0.36
GAR1Q9NY12 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
GAR1Q9NY12 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.3■□□□□ 0.36
GAR1Q9NY12 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GAR1Q9NY12 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GAR1Q9NY12 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GAR1Q9NY12 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.3■□□□□ 0.36
GAR1Q9NY12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 AL139246.5-201ENST00000606645 996 ntBASIC17.29■□□□□ 0.36
GAR1Q9NY12 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GAR1Q9NY12 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GAR1Q9NY12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GAR1Q9NY12 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.28■□□□□ 0.36
GAR1Q9NY12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GAR1Q9NY12 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.28■□□□□ 0.36
GAR1Q9NY12 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
GAR1Q9NY12 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 DUX4L4-201ENST00000566884 1269 ntBASIC17.28■□□□□ 0.36
GAR1Q9NY12 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GAR1Q9NY12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GAR1Q9NY12 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms