Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 IRS3P-201ENST00000223076 1006 ntBASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NECTIN3Q9NQS3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 AC010141.3-201ENST00000456659 717 ntBASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NECTIN3Q9NQS3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 AC087239.1-201ENST00000622671 572 ntBASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NECTIN3Q9NQS3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 MIR572-201ENST00000384983 95 ntBASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 AC087742.1-201ENST00000575880 1738 ntBASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.47■□□□□ 0.87
NECTIN3Q9NQS3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NECTIN3Q9NQS3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NECTIN3Q9NQS3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NECTIN3Q9NQS3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms