Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 BID-214ENST00000617586 542 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF38Q9H0F5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 C1orf229-201ENST00000623686 2258 ntBASIC22.31■■□□□ 1.16
RNF38Q9H0F5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF38Q9H0F5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 AL034346.1-201ENST00000568244 1277 ntBASIC22.3■■□□□ 1.16
RNF38Q9H0F5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RNF38Q9H0F5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 AC011767.1-201ENST00000617410 1153 ntBASIC22.29■■□□□ 1.16
RNF38Q9H0F5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF38Q9H0F5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 AP006587.3-201ENST00000525742 1516 ntBASIC22.28■■□□□ 1.16
RNF38Q9H0F5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RNF38Q9H0F5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 KRT18P11-201ENST00000435214 1283 ntBASIC22.27■■□□□ 1.16
RNF38Q9H0F5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 AP001160.3-201ENST00000601484 763 ntBASIC22.27■■□□□ 1.16
RNF38Q9H0F5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF38Q9H0F5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RNF38Q9H0F5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 ID1-201ENST00000376105 1233 ntBASIC22.26■■□□□ 1.15
RNF38Q9H0F5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF38Q9H0F5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 AC026185.1-201ENST00000445748 174 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms