Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC079089.2-201ENST00000531211 1277 ntBASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NECTIN4Q96NY8 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 RARRES2P4-201ENST00000514074 484 ntBASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 AL034346.1-201ENST00000568244 1277 ntBASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NECTIN4Q96NY8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 AP004607.7-201ENST00000527152 1677 ntBASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 RPS2P52-201ENST00000469610 820 ntBASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.36■■□□□ 1.17
NECTIN4Q96NY8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 DUSP5P2-201ENST00000426873 1033 ntBASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 EEF1DP3-203ENST00000566025 782 ntBASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 AC053503.5-201ENST00000601508 636 ntBASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
NECTIN4Q96NY8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 AC097658.1-201ENST00000475555 843 ntBASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NECTIN4Q96NY8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 GCSHP5-201ENST00000443090 522 ntBASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 AC098590.1-201ENST00000468126 897 ntBASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NECTIN4Q96NY8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.33■■□□□ 1.16
NECTIN4Q96NY8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.33■■□□□ 1.16
NECTIN4Q96NY8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.33■■□□□ 1.16
NECTIN4Q96NY8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 ESRRAP1-201ENST00000400596 1257 ntBASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 BX276092.2-201ENST00000417668 665 ntBASIC22.32■■□□□ 1.16
NECTIN4Q96NY8 AC093787.1-201ENST00000450396 207 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms