Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC46A1Q96NT5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 SLC29A4P1-201ENST00000398760 971 ntBASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 AL138781.1-201ENST00000566567 1274 ntBASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 UBE2DNL-204ENST00000602536 740 ntBASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC46A1Q96NT5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC46A1Q96NT5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC46A1Q96NT5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC46A1Q96NT5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC46A1Q96NT5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC46A1Q96NT5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 MYCNOS-205ENST00000641950 531 ntBASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC46A1Q96NT5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 AP001160.3-201ENST00000601484 763 ntBASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC46A1Q96NT5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 AC133041.1-202ENST00000642053 222 ntBASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC46A1Q96NT5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 AC073210.2-201ENST00000430369 194 ntBASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 AC069152.1-201ENST00000438030 544 ntBASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 FAM201B-201ENST00000458407 597 ntBASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 AF201337.1-201ENST00000520239 748 ntBASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms