Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 DUSP5P2-201ENST00000426873 1033 ntBASIC26.57■■□□□ 1.84
CNKSR1Q969H4 AC093787.1-201ENST00000450396 207 ntBASIC26.57■■□□□ 1.84
CNKSR1Q969H4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 EEF1DP3-203ENST00000566025 782 ntBASIC26.57■■□□□ 1.84
CNKSR1Q969H4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNKSR1Q969H4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 AC098590.1-201ENST00000468126 897 ntBASIC26.56■■□□□ 1.84
CNKSR1Q969H4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.56■■□□□ 1.84
CNKSR1Q969H4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 AC053503.5-201ENST00000601508 636 ntBASIC26.55■■□□□ 1.84
CNKSR1Q969H4 AC016405.3-201ENST00000607710 860 ntBASIC26.55■■□□□ 1.84
CNKSR1Q969H4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNKSR1Q969H4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.54■■□□□ 1.84
CNKSR1Q969H4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNKSR1Q969H4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNKSR1Q969H4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CNKSR1Q969H4 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.54■■□□□ 1.84
CNKSR1Q969H4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNKSR1Q969H4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 BX276092.2-201ENST00000417668 665 ntBASIC26.53■■□□□ 1.84
CNKSR1Q969H4 GCSHP5-201ENST00000443090 522 ntBASIC26.53■■□□□ 1.84
CNKSR1Q969H4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 AC083880.1-201ENST00000608266 535 ntBASIC26.53■■□□□ 1.84
CNKSR1Q969H4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.53■■□□□ 1.84
CNKSR1Q969H4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 ESRRAP1-201ENST00000400596 1257 ntBASIC26.52■■□□□ 1.84
CNKSR1Q969H4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 AC097658.1-201ENST00000475555 843 ntBASIC26.52■■□□□ 1.84
CNKSR1Q969H4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 MYC-209ENST00000641252 345 ntBASIC26.52■■□□□ 1.84
CNKSR1Q969H4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CNKSR1Q969H4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CNKSR1Q969H4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.51■■□□□ 1.84
CNKSR1Q969H4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 AL034346.1-201ENST00000568244 1277 ntBASIC26.51■■□□□ 1.83
CNKSR1Q969H4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CNKSR1Q969H4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CNKSR1Q969H4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CNKSR1Q969H4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CNKSR1Q969H4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CNKSR1Q969H4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CNKSR1Q969H4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CNKSR1Q969H4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms