Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPM4Q8TD43 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 AL512625.2-201ENST00000417533 625 ntBASIC25.73■■□□□ 1.71
TRPM4Q8TD43 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRPM4Q8TD43 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 LINC01124-201ENST00000409786 2117 ntBASIC25.72■■□□□ 1.71
TRPM4Q8TD43 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
TRPM4Q8TD43 AP004607.7-201ENST00000527152 1677 ntBASIC25.71■■□□□ 1.71
TRPM4Q8TD43 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 ABCB10P4-201ENST00000566803 2184 ntBASIC25.71■■□□□ 1.71
TRPM4Q8TD43 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 EEF1DP3-203ENST00000566025 782 ntBASIC25.71■■□□□ 1.71
TRPM4Q8TD43 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 AC006058.3-201ENST00000606217 1069 ntBASIC25.71■■□□□ 1.71
TRPM4Q8TD43 AC008694.1-202ENST00000636953 945 ntBASIC25.71■■□□□ 1.71
TRPM4Q8TD43 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPM4Q8TD43 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 AC128676.1-201ENST00000454392 318 ntBASIC25.7■■□□□ 1.7
TRPM4Q8TD43 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 AC079089.2-201ENST00000531211 1277 ntBASIC25.7■■□□□ 1.7
TRPM4Q8TD43 AC069236.1-201ENST00000604339 616 ntBASIC25.7■■□□□ 1.7
TRPM4Q8TD43 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.7■■□□□ 1.7
TRPM4Q8TD43 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 AC142381.4-202ENST00000563973 229 ntBASIC25.69■■□□□ 1.7
TRPM4Q8TD43 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
TRPM4Q8TD43 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 RPS2P4-201ENST00000476944 856 ntBASIC25.68■■□□□ 1.7
TRPM4Q8TD43 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPM4Q8TD43 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 AC097658.1-201ENST00000475555 843 ntBASIC25.67■■□□□ 1.7
TRPM4Q8TD43 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.67■■□□□ 1.7
TRPM4Q8TD43 AC091874.3-201ENST00000512672 1195 ntBASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms