Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CNIH3Q8TBE1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.58■□□□□ 0.72
CNIH3Q8TBE1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 KRT18P60-201ENST00000312876 1297 ntBASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNIH3Q8TBE1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNIH3Q8TBE1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 DUX4L18-201ENST00000553347 1267 ntBASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.55■□□□□ 0.72
CNIH3Q8TBE1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNIH3Q8TBE1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CNIH3Q8TBE1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms