Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SPTSSBQ8NFR3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SPTSSBQ8NFR3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.83□□□□□ -0.52
SPTSSBQ8NFR3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.83□□□□□ -0.52
SPTSSBQ8NFR3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 ZNRF2P1-201ENST00000441407 443 ntBASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SPTSSBQ8NFR3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SPTSSBQ8NFR3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SPTSSBQ8NFR3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms