Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
RETREG2Q8NC44 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 CDCA4P2-201ENST00000441182 718 ntBASIC24.32■■□□□ 1.48
RETREG2Q8NC44 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 KRT18P61-201ENST00000585825 1298 ntBASIC24.32■■□□□ 1.48
RETREG2Q8NC44 TPRG1LP1-201ENST00000598702 760 ntBASIC24.32■■□□□ 1.48
RETREG2Q8NC44 AC073111.5-205ENST00000641717 521 ntBASIC24.32■■□□□ 1.48
RETREG2Q8NC44 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.32■■□□□ 1.48
RETREG2Q8NC44 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RETREG2Q8NC44 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AC026185.1-201ENST00000445748 174 ntBASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AC010141.3-201ENST00000456659 717 ntBASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 AP004607.4-201ENST00000530158 1459 ntBASIC24.3■■□□□ 1.48
RETREG2Q8NC44 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RETREG2Q8NC44 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 BID-214ENST00000617586 542 ntTSL 5 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 BX005040.4-201ENST00000637145 1518 ntBASIC24.29■■□□□ 1.48
RETREG2Q8NC44 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RETREG2Q8NC44 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 RAP2CP1-201ENST00000605103 478 ntBASIC24.28■■□□□ 1.48
RETREG2Q8NC44 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RETREG2Q8NC44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 AC004854.2-201ENST00000608450 1441 ntBASIC24.27■■□□□ 1.48
RETREG2Q8NC44 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
RETREG2Q8NC44 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RETREG2Q8NC44 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
RETREG2Q8NC44 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RETREG2Q8NC44 AC137767.1-201ENST00000602918 1920 ntBASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms