Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC43Q8N309 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC43Q8N309 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC43Q8N309 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC43Q8N309 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC43Q8N309 AP004607.7-201ENST00000527152 1677 ntBASIC23.18■■□□□ 1.3
LRRC43Q8N309 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LRRC43Q8N309 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.18■■□□□ 1.3
LRRC43Q8N309 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.17■■□□□ 1.3
LRRC43Q8N309 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 AC010141.2-201ENST00000452426 721 ntBASIC23.17■■□□□ 1.3
LRRC43Q8N309 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
LRRC43Q8N309 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.17■■□□□ 1.3
LRRC43Q8N309 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LRRC43Q8N309 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.16■■□□□ 1.3
LRRC43Q8N309 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC43Q8N309 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC43Q8N309 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC43Q8N309 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC43Q8N309 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.16■■□□□ 1.3
LRRC43Q8N309 AC142086.2-201ENST00000569753 217 ntBASIC23.16■■□□□ 1.3
LRRC43Q8N309 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.16■■□□□ 1.3
LRRC43Q8N309 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LRRC43Q8N309 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC43Q8N309 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LRRC43Q8N309 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
LRRC43Q8N309 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC43Q8N309 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC43Q8N309 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC43Q8N309 AC083906.2-201ENST00000511578 360 ntBASIC23.15■■□□□ 1.3
LRRC43Q8N309 AL034346.1-201ENST00000568244 1277 ntBASIC23.15■■□□□ 1.3
LRRC43Q8N309 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
LRRC43Q8N309 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.15■■□□□ 1.3
LRRC43Q8N309 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC43Q8N309 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LRRC43Q8N309 OR7E47P-201ENST00000546390 1422 ntBASIC23.15■■□□□ 1.3
LRRC43Q8N309 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LRRC43Q8N309 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.14■■□□□ 1.29
LRRC43Q8N309 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LRRC43Q8N309 ABHD17AP1-201ENST00000358206 933 ntBASIC23.14■■□□□ 1.29
LRRC43Q8N309 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LRRC43Q8N309 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
LRRC43Q8N309 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.14■■□□□ 1.29
LRRC43Q8N309 TSPY6P-201ENST00000448518 926 ntBASIC23.14■■□□□ 1.29
LRRC43Q8N309 AC138907.5-202ENST00000569484 235 ntBASIC23.14■■□□□ 1.29
LRRC43Q8N309 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.14■■□□□ 1.29
LRRC43Q8N309 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
LRRC43Q8N309 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.14■■□□□ 1.29
LRRC43Q8N309 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC43Q8N309 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC43Q8N309 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.13■■□□□ 1.29
LRRC43Q8N309 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC43Q8N309 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.13■■□□□ 1.29
LRRC43Q8N309 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.13■■□□□ 1.29
LRRC43Q8N309 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC43Q8N309 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC43Q8N309 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.13■■□□□ 1.29
LRRC43Q8N309 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LRRC43Q8N309 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRC43Q8N309 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LRRC43Q8N309 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.12■■□□□ 1.29
LRRC43Q8N309 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRC43Q8N309 KRT18P20-201ENST00000548986 1279 ntBASIC23.12■■□□□ 1.29
LRRC43Q8N309 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.12■■□□□ 1.29
LRRC43Q8N309 SLC7A5P2-201ENST00000553010 536 ntBASIC23.12■■□□□ 1.29
LRRC43Q8N309 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.12■■□□□ 1.29
LRRC43Q8N309 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
LRRC43Q8N309 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LRRC43Q8N309 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRC43Q8N309 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LRRC43Q8N309 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.11■■□□□ 1.29
LRRC43Q8N309 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.11■■□□□ 1.29
LRRC43Q8N309 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.11■■□□□ 1.29
LRRC43Q8N309 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 GUSBP6-202ENST00000438529 1198 ntBASIC23.11■■□□□ 1.29
LRRC43Q8N309 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRC43Q8N309 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRC43Q8N309 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC43Q8N309 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms