Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 AC233992.3-201ENST00000607491 485 ntBASIC20.07■□□□□ 0.8
CCDC71Q8IV32 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC71Q8IV32 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 AL162430.1-201ENST00000480705 870 ntBASIC20.06■□□□□ 0.8
CCDC71Q8IV32 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC71Q8IV32 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.05■□□□□ 0.8
CCDC71Q8IV32 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC71Q8IV32 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC71Q8IV32 AC144652.1-201ENST00000609974 1624 ntBASIC20.04■□□□□ 0.8
CCDC71Q8IV32 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 BX842568.3-201ENST00000418104 571 ntBASIC20.03■□□□□ 0.8
CCDC71Q8IV32 pRNA.6-201ENST00000610482 90 ntBASIC20.03■□□□□ 0.8
CCDC71Q8IV32 pRNA.5-201ENST00000612139 90 ntBASIC20.03■□□□□ 0.8
CCDC71Q8IV32 pRNA.11-201ENST00000618423 90 ntBASIC20.03■□□□□ 0.8
CCDC71Q8IV32 pRNA.13-201ENST00000619112 90 ntBASIC20.03■□□□□ 0.8
CCDC71Q8IV32 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC71Q8IV32 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC71Q8IV32 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CCDC71Q8IV32 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC71Q8IV32 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC71Q8IV32 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC71Q8IV32 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC71Q8IV32 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC71Q8IV32 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC71Q8IV32 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC71Q8IV32 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC71Q8IV32 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20■□□□□ 0.79
CCDC71Q8IV32 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms