Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC28Q86X40 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LRRC28Q86X40 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRRC28Q86X40 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC28Q86X40 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC28Q86X40 GOLGA2P6-201ENST00000340929 2049 ntBASIC19■□□□□ 0.63
LRRC28Q86X40 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC28Q86X40 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 SRD5A1P1-201ENST00000442297 786 ntBASIC19■□□□□ 0.63
LRRC28Q86X40 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LRRC28Q86X40 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19■□□□□ 0.63
LRRC28Q86X40 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC28Q86X40 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRRC28Q86X40 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC28Q86X40 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC28Q86X40 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRRC28Q86X40 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19■□□□□ 0.63
LRRC28Q86X40 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRRC28Q86X40 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC28Q86X40 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
LRRC28Q86X40 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC28Q86X40 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 AC009102.2-201ENST00000606772 1639 ntBASIC18.97■□□□□ 0.63
LRRC28Q86X40 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRC28Q86X40 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 AL157384.1-201ENST00000445995 2473 ntBASIC18.97■□□□□ 0.63
LRRC28Q86X40 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRC28Q86X40 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC28Q86X40 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC28Q86X40 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.96■□□□□ 0.63
LRRC28Q86X40 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LRRC28Q86X40 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
LRRC28Q86X40 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC28Q86X40 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.96■□□□□ 0.63
LRRC28Q86X40 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC28Q86X40 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LRRC28Q86X40 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRRC28Q86X40 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC28Q86X40 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC28Q86X40 AC144652.1-201ENST00000609974 1624 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms