Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NFE4Q86UQ8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.29■□□□□ 0.04
NFE4Q86UQ8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 AC096631.2-201ENST00000436136 790 ntBASIC15.28■□□□□ 0.04
NFE4Q86UQ8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NFE4Q86UQ8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 AL353803.4-201ENST00000565882 1934 ntBASIC15.27■□□□□ 0.04
NFE4Q86UQ8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NFE4Q86UQ8 AC133561.4-201ENST00000566112 224 ntBASIC15.27■□□□□ 0.04
NFE4Q86UQ8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NFE4Q86UQ8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 AC007952.6-201ENST00000573168 2673 ntBASIC15.26■□□□□ 0.03
NFE4Q86UQ8 AC003957.1-201ENST00000625108 2673 ntBASIC15.26■□□□□ 0.03
NFE4Q86UQ8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NFE4Q86UQ8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 AC005229.4-201ENST00000610085 2198 ntBASIC15.25■□□□□ 0.03
NFE4Q86UQ8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NFE4Q86UQ8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 MIR638-201ENST00000385237 100 ntBASIC15.24■□□□□ 0.03
NFE4Q86UQ8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.24■□□□□ 0.03
NFE4Q86UQ8 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 AC241377.3-202ENST00000626088 1088 ntBASIC15.24■□□□□ 0.03
NFE4Q86UQ8 AC241585.3-202ENST00000628937 1088 ntBASIC15.24■□□□□ 0.03
NFE4Q86UQ8 AC245100.8-202ENST00000629247 1058 ntBASIC15.24■□□□□ 0.03
NFE4Q86UQ8 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.24■□□□□ 0.03
NFE4Q86UQ8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NFE4Q86UQ8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms