Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 AP006587.3-201ENST00000525742 1516 ntBASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.55■■□□□ 1.04
BRAT1Q6PJG6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 AC092053.2-201ENST00000640557 1818 ntBASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRAT1Q6PJG6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BRAT1Q6PJG6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 KRT87P-202ENST00000534226 1464 ntBASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 AC233723.2-201ENST00000623798 2106 ntBASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 AC242852.2-201ENST00000615738 1807 ntBASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BRAT1Q6PJG6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.52■■□□□ 1.03
BRAT1Q6PJG6 AP004607.4-201ENST00000530158 1459 ntBASIC21.52■■□□□ 1.03
BRAT1Q6PJG6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BRAT1Q6PJG6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 AC004854.2-201ENST00000608450 1441 ntBASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BRAT1Q6PJG6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.49■■□□□ 1.03
BRAT1Q6PJG6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms