Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88Q6PEY1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 RP9P-202ENST00000450133 1212 ntBASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM88Q6PEY1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 AC133552.2-201ENST00000619106 1032 ntBASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM88Q6PEY1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 KRT18P60-201ENST00000312876 1297 ntBASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 AC093536.1-201ENST00000569153 554 ntBASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 AC009831.1-201ENST00000580420 1582 ntBASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 AC244015.2-201ENST00000616358 1861 ntBASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88Q6PEY1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 FEM1AP1-201ENST00000431297 1995 ntBASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM88Q6PEY1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms