Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 AC106739.1-201ENST00000617035 715 ntBASIC19.51■□□□□ 0.71
NIPAL3Q6P499 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 AC244015.2-201ENST00000616358 1861 ntBASIC19.5■□□□□ 0.71
NIPAL3Q6P499 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 PKD1P6-201ENST00000343738 4769 ntBASIC19.5■□□□□ 0.71
NIPAL3Q6P499 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 AL139246.5-201ENST00000606645 996 ntBASIC19.5■□□□□ 0.71
NIPAL3Q6P499 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NIPAL3Q6P499 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 AC010525.1-201ENST00000585559 441 ntBASIC19.49■□□□□ 0.71
NIPAL3Q6P499 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.49■□□□□ 0.71
NIPAL3Q6P499 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL3Q6P499 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.47■□□□□ 0.71
NIPAL3Q6P499 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 SLC47A1P1-202ENST00000449666 945 ntBASIC19.47■□□□□ 0.71
NIPAL3Q6P499 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL3Q6P499 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.46■□□□□ 0.71
NIPAL3Q6P499 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 AC005229.4-201ENST00000610085 2198 ntBASIC19.46■□□□□ 0.71
NIPAL3Q6P499 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPAL3Q6P499 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms