Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 SPCS2P3-201ENST00000500401 656 ntBASIC20.22■□□□□ 0.83
LPCAT4Q643R3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LPCAT4Q643R3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
LPCAT4Q643R3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.2■□□□□ 0.82
LPCAT4Q643R3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 CA15P2-201ENST00000611168 834 ntBASIC20.2■□□□□ 0.82
LPCAT4Q643R3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LPCAT4Q643R3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 AC026471.6-201ENST00000622954 1905 ntBASIC20.19■□□□□ 0.82
LPCAT4Q643R3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LPCAT4Q643R3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 LINC01529-204ENST00000636474 1715 ntBASIC20.18■□□□□ 0.82
LPCAT4Q643R3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LPCAT4Q643R3 AL020996.1-203ENST00000536896 2307 ntBASIC20.18■□□□□ 0.82
LPCAT4Q643R3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 LONRF2P2-201ENST00000439212 571 ntBASIC20.17■□□□□ 0.82
LPCAT4Q643R3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.17■□□□□ 0.82
LPCAT4Q643R3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 AC004448.1-201ENST00000458332 883 ntBASIC20.16■□□□□ 0.82
LPCAT4Q643R3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms