Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN18P56856 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN18P56856 KRT87P-202ENST00000534226 1464 ntBASIC19.24■□□□□ 0.67
CLDN18P56856 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN18P56856 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN18P56856 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN18P56856 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN18P56856 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN18P56856 AP006587.3-201ENST00000525742 1516 ntBASIC19.24■□□□□ 0.67
CLDN18P56856 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDN18P56856 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN18P56856 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN18P56856 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN18P56856 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN18P56856 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.23■□□□□ 0.67
CLDN18P56856 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.23■□□□□ 0.67
CLDN18P56856 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN18P56856 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN18P56856 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN18P56856 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN18P56856 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN18P56856 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN18P56856 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN18P56856 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN18P56856 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN18P56856 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN18P56856 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLDN18P56856 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN18P56856 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN18P56856 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN18P56856 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN18P56856 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN18P56856 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CLDN18P56856 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 KRT19P1-201ENST00000405746 1186 ntBASIC19.21■□□□□ 0.67
CLDN18P56856 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN18P56856 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.21■□□□□ 0.67
CLDN18P56856 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 AL137784.2-201ENST00000607332 1000 ntBASIC19.21■□□□□ 0.67
CLDN18P56856 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN18P56856 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN18P56856 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN18P56856 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLDN18P56856 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN18P56856 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN18P56856 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN18P56856 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN18P56856 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN18P56856 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN18P56856 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN18P56856 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN18P56856 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN18P56856 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN18P56856 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.2■□□□□ 0.66
CLDN18P56856 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN18P56856 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN18P56856 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN18P56856 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN18P56856 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN18P56856 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN18P56856 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN18P56856 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CLDN18P56856 AC137761.2-201ENST00000561729 223 ntBASIC19.19■□□□□ 0.66
CLDN18P56856 AC145350.3-201ENST00000569033 163 ntBASIC19.19■□□□□ 0.66
CLDN18P56856 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN18P56856 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN18P56856 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN18P56856 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN18P56856 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 AC068473.5-201ENST00000616428 2072 ntBASIC19.18■□□□□ 0.66
CLDN18P56856 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN18P56856 AC006015.1-201ENST00000429970 570 ntBASIC19.18■□□□□ 0.66
CLDN18P56856 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN18P56856 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms