Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
GABRA4P48169 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA4P48169 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA4P48169 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA4P48169 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA4P48169 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.44■□□□□ 0.86
GABRA4P48169 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GABRA4P48169 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA4P48169 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GABRA4P48169 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GABRA4P48169 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 KRT19P1-201ENST00000405746 1186 ntBASIC20.43■□□□□ 0.86
GABRA4P48169 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.43■□□□□ 0.86
GABRA4P48169 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.43■□□□□ 0.86
GABRA4P48169 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
GABRA4P48169 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.43■□□□□ 0.86
GABRA4P48169 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GABRA4P48169 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.43■□□□□ 0.86
GABRA4P48169 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
GABRA4P48169 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA4P48169 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA4P48169 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA4P48169 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA4P48169 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.42■□□□□ 0.86
GABRA4P48169 AC004911.1-201ENST00000416316 871 ntBASIC20.42■□□□□ 0.86
GABRA4P48169 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.42■□□□□ 0.86
GABRA4P48169 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.42■□□□□ 0.86
GABRA4P48169 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.42■□□□□ 0.86
GABRA4P48169 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.42■□□□□ 0.86
GABRA4P48169 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA4P48169 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA4P48169 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRA4P48169 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRA4P48169 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRA4P48169 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.41■□□□□ 0.86
GABRA4P48169 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.41■□□□□ 0.86
GABRA4P48169 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.41■□□□□ 0.86
GABRA4P48169 AC104187.1-201ENST00000607510 612 ntBASIC20.41■□□□□ 0.86
GABRA4P48169 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
GABRA4P48169 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GABRA4P48169 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA4P48169 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRA4P48169 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GABRA4P48169 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GABRA4P48169 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.4■□□□□ 0.86
GABRA4P48169 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GABRA4P48169 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
GABRA4P48169 AC137761.2-201ENST00000561729 223 ntBASIC20.4■□□□□ 0.86
GABRA4P48169 AC145350.3-201ENST00000569033 163 ntBASIC20.4■□□□□ 0.86
GABRA4P48169 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.4■□□□□ 0.86
GABRA4P48169 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA4P48169 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA4P48169 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA4P48169 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRA4P48169 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRA4P48169 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA4P48169 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA4P48169 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRA4P48169 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.39■□□□□ 0.86
GABRA4P48169 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRA4P48169 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.39■□□□□ 0.86
GABRA4P48169 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA4P48169 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA4P48169 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GABRA4P48169 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA4P48169 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA4P48169 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA4P48169 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.39■□□□□ 0.85
GABRA4P48169 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.39■□□□□ 0.85
GABRA4P48169 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.39■□□□□ 0.85
GABRA4P48169 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.39■□□□□ 0.85
GABRA4P48169 RARRES2P11-201ENST00000635158 484 ntBASIC20.39■□□□□ 0.85
GABRA4P48169 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA4P48169 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA4P48169 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.39■□□□□ 0.85
GABRA4P48169 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA4P48169 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA4P48169 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.38■□□□□ 0.85
GABRA4P48169 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms