Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.54■■■□□ 2.8
KDM5CP41229 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
KDM5CP41229 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC32.54■■■□□ 2.8
KDM5CP41229 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
KDM5CP41229 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.54■■■□□ 2.8
KDM5CP41229 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
KDM5CP41229 FXN-202ENST00000396364 980 ntTSL 5 BASIC32.53■■■□□ 2.8
KDM5CP41229 AL512625.2-201ENST00000417533 625 ntBASIC32.53■■■□□ 2.8
KDM5CP41229 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC32.53■■■□□ 2.8
KDM5CP41229 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.53■■■□□ 2.8
KDM5CP41229 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
KDM5CP41229 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
KDM5CP41229 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
KDM5CP41229 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
KDM5CP41229 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
KDM5CP41229 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
KDM5CP41229 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC32.53■■■□□ 2.8
KDM5CP41229 RHEB-204ENST00000472642 900 ntTSL 3 BASIC32.53■■■□□ 2.8
KDM5CP41229 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC32.52■■■□□ 2.8
KDM5CP41229 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC32.52■■■□□ 2.8
KDM5CP41229 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC32.52■■■□□ 2.8
KDM5CP41229 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC32.52■■■□□ 2.8
KDM5CP41229 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC32.51■■■□□ 2.8
KDM5CP41229 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC32.51■■■□□ 2.8
KDM5CP41229 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC32.51■■■□□ 2.79
KDM5CP41229 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC32.51■■■□□ 2.79
KDM5CP41229 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
KDM5CP41229 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC32.51■■■□□ 2.79
KDM5CP41229 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC32.51■■■□□ 2.79
KDM5CP41229 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
KDM5CP41229 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC32.5■■■□□ 2.79
KDM5CP41229 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
KDM5CP41229 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC32.5■■■□□ 2.79
KDM5CP41229 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
KDM5CP41229 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC32.5■■■□□ 2.79
KDM5CP41229 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC32.5■■■□□ 2.79
KDM5CP41229 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
KDM5CP41229 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.49■■■□□ 2.79
KDM5CP41229 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
KDM5CP41229 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC32.49■■■□□ 2.79
KDM5CP41229 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
KDM5CP41229 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
KDM5CP41229 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
KDM5CP41229 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.49■■■□□ 2.79
KDM5CP41229 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC32.49■■■□□ 2.79
KDM5CP41229 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.49■■■□□ 2.79
KDM5CP41229 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
KDM5CP41229 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
KDM5CP41229 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
KDM5CP41229 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC32.48■■■□□ 2.79
KDM5CP41229 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
KDM5CP41229 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
KDM5CP41229 AL596275.1-201ENST00000423464 877 ntBASIC32.48■■■□□ 2.79
KDM5CP41229 IRX5-204ENST00000560154 879 ntTSL 5 BASIC32.48■■■□□ 2.79
KDM5CP41229 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
KDM5CP41229 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
KDM5CP41229 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
KDM5CP41229 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
KDM5CP41229 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.47■■■□□ 2.79
KDM5CP41229 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
KDM5CP41229 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
KDM5CP41229 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
KDM5CP41229 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
KDM5CP41229 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC32.47■■■□□ 2.79
KDM5CP41229 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
KDM5CP41229 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KDM5CP41229 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC32.46■■■□□ 2.79
KDM5CP41229 BX276092.2-201ENST00000417668 665 ntBASIC32.46■■■□□ 2.79
KDM5CP41229 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC32.46■■■□□ 2.79
KDM5CP41229 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KDM5CP41229 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KDM5CP41229 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KDM5CP41229 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.45■■■□□ 2.79
KDM5CP41229 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.45■■■□□ 2.79
KDM5CP41229 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC32.45■■■□□ 2.79
KDM5CP41229 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
KDM5CP41229 AC091874.3-201ENST00000512672 1195 ntBASIC32.45■■■□□ 2.79
KDM5CP41229 AC069236.1-201ENST00000604339 616 ntBASIC32.45■■■□□ 2.79
KDM5CP41229 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
KDM5CP41229 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
KDM5CP41229 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC32.45■■■□□ 2.79
KDM5CP41229 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
KDM5CP41229 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.45■■■□□ 2.78
KDM5CP41229 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.45■■■□□ 2.78
KDM5CP41229 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC32.45■■■□□ 2.78
KDM5CP41229 ESRRAP1-201ENST00000400596 1257 ntBASIC32.45■■■□□ 2.78
KDM5CP41229 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.45■■■□□ 2.78
KDM5CP41229 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.45■■■□□ 2.78
KDM5CP41229 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
KDM5CP41229 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.44■■■□□ 2.78
KDM5CP41229 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC32.44■■■□□ 2.78
KDM5CP41229 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
KDM5CP41229 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.44■■■□□ 2.78
KDM5CP41229 LINC01124-201ENST00000409786 2117 ntBASIC32.44■■■□□ 2.78
KDM5CP41229 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
KDM5CP41229 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KDM5CP41229 AP006587.3-201ENST00000525742 1516 ntBASIC32.43■■■□□ 2.78
KDM5CP41229 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KDM5CP41229 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC32.43■■■□□ 2.78
KDM5CP41229 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms