Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.63■■■□□ 2.01
ATP6V1AP38606 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 MKRN4P-201ENST00000444706 1521 ntBASIC27.62■■■□□ 2.01
ATP6V1AP38606 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 LINC01960-201ENST00000563759 1884 ntBASIC27.62■■■□□ 2.01
ATP6V1AP38606 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.62■■■□□ 2.01
ATP6V1AP38606 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
ATP6V1AP38606 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.62■■■□□ 2.01
ATP6V1AP38606 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.62■■■□□ 2.01
ATP6V1AP38606 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATP6V1AP38606 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.61■■■□□ 2.01
ATP6V1AP38606 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATP6V1AP38606 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ATP6V1AP38606 KRT18P29-201ENST00000397031 1267 ntBASIC27.61■■■□□ 2.01
ATP6V1AP38606 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.61■■■□□ 2.01
ATP6V1AP38606 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.61■■■□□ 2.01
ATP6V1AP38606 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.61■■■□□ 2.01
ATP6V1AP38606 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ATP6V1AP38606 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
ATP6V1AP38606 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ATP6V1AP38606 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.6■■■□□ 2.01
ATP6V1AP38606 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.6■■■□□ 2.01
ATP6V1AP38606 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
ATP6V1AP38606 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATP6V1AP38606 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATP6V1AP38606 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.59■■■□□ 2.01
ATP6V1AP38606 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
ATP6V1AP38606 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
ATP6V1AP38606 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.59■■■□□ 2.01
ATP6V1AP38606 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATP6V1AP38606 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ATP6V1AP38606 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.58■■■□□ 2.01
ATP6V1AP38606 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.58■■■□□ 2.01
ATP6V1AP38606 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.58■■■□□ 2.01
ATP6V1AP38606 EEF1DP3-203ENST00000566025 782 ntBASIC27.58■■■□□ 2.01
ATP6V1AP38606 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.58■■■□□ 2.01
ATP6V1AP38606 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ATP6V1AP38606 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ATP6V1AP38606 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
ATP6V1AP38606 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.58■■■□□ 2
ATP6V1AP38606 ANOS2P-203ENST00000472227 1816 ntBASIC27.57■■■□□ 2
ATP6V1AP38606 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
ATP6V1AP38606 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.57■■■□□ 2
ATP6V1AP38606 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP6V1AP38606 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP6V1AP38606 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP6V1AP38606 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.57■■■□□ 2
ATP6V1AP38606 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.57■■■□□ 2
ATP6V1AP38606 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ATP6V1AP38606 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.56■■■□□ 2
ATP6V1AP38606 PRORSD1P-201ENST00000295112 541 ntBASIC27.56■■■□□ 2
ATP6V1AP38606 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ATP6V1AP38606 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.56■■■□□ 2
ATP6V1AP38606 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.56■■■□□ 2
ATP6V1AP38606 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.56■■■□□ 2
ATP6V1AP38606 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.56■■■□□ 2
ATP6V1AP38606 AC093787.1-201ENST00000450396 207 ntBASIC27.56■■■□□ 2
ATP6V1AP38606 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.56■■■□□ 2
ATP6V1AP38606 AC007322.4-201ENST00000509611 723 ntBASIC27.56■■■□□ 2
ATP6V1AP38606 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.56■■■□□ 2
ATP6V1AP38606 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.56■■■□□ 2
ATP6V1AP38606 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.56■■■□□ 2
ATP6V1AP38606 OR10C1-204ENST00000622521 1039 ntBASIC27.56■■■□□ 2
ATP6V1AP38606 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ATP6V1AP38606 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ATP6V1AP38606 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.56■■■□□ 2
ATP6V1AP38606 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
ATP6V1AP38606 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
ATP6V1AP38606 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
ATP6V1AP38606 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.55■■■□□ 2
ATP6V1AP38606 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
ATP6V1AP38606 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.55■■■□□ 2
ATP6V1AP38606 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
ATP6V1AP38606 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.54■■■□□ 2
ATP6V1AP38606 OR7E47P-201ENST00000546390 1422 ntBASIC27.54■■■□□ 2
ATP6V1AP38606 AC053503.5-201ENST00000601508 636 ntBASIC27.54■■■□□ 2
ATP6V1AP38606 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.54■■■□□ 2
ATP6V1AP38606 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V1AP38606 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V1AP38606 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V1AP38606 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V1AP38606 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.53■■■□□ 2
ATP6V1AP38606 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V1AP38606 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.53■■■□□ 2
ATP6V1AP38606 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ATP6V1AP38606 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.53■■■□□ 2
ATP6V1AP38606 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.53■■■□□ 2
ATP6V1AP38606 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
ATP6V1AP38606 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
ATP6V1AP38606 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms