Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMP1P11279 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMP1P11279 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LAMP1P11279 AC005229.4-201ENST00000610085 2198 ntBASIC20.35■□□□□ 0.85
LAMP1P11279 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMP1P11279 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 Z98882.1-201ENST00000622160 2253 ntBASIC20.34■□□□□ 0.85
LAMP1P11279 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.34■□□□□ 0.85
LAMP1P11279 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
LAMP1P11279 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
LAMP1P11279 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.34■□□□□ 0.85
LAMP1P11279 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.34■□□□□ 0.85
LAMP1P11279 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.34■□□□□ 0.85
LAMP1P11279 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.34■□□□□ 0.85
LAMP1P11279 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
LAMP1P11279 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LAMP1P11279 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.33■□□□□ 0.85
LAMP1P11279 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.33■□□□□ 0.85
LAMP1P11279 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LAMP1P11279 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LAMP1P11279 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.33■□□□□ 0.85
LAMP1P11279 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.33■□□□□ 0.85
LAMP1P11279 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.33■□□□□ 0.85
LAMP1P11279 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LAMP1P11279 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.33■□□□□ 0.84
LAMP1P11279 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.33■□□□□ 0.84
LAMP1P11279 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LAMP1P11279 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.32■□□□□ 0.84
LAMP1P11279 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LAMP1P11279 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LAMP1P11279 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 PKD1P6-201ENST00000343738 4769 ntBASIC20.32■□□□□ 0.84
LAMP1P11279 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.32■□□□□ 0.84
LAMP1P11279 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.32■□□□□ 0.84
LAMP1P11279 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMP1P11279 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.32■□□□□ 0.84
LAMP1P11279 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.32■□□□□ 0.84
LAMP1P11279 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LAMP1P11279 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.32■□□□□ 0.84
LAMP1P11279 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 AL136116.3-201ENST00000402907 1138 ntBASIC20.31■□□□□ 0.84
LAMP1P11279 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.31■□□□□ 0.84
LAMP1P11279 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 AP005435.1-201ENST00000529293 1178 ntBASIC20.31■□□□□ 0.84
LAMP1P11279 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LAMP1P11279 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
LAMP1P11279 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.3■□□□□ 0.84
LAMP1P11279 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMP1P11279 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
LAMP1P11279 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.3■□□□□ 0.84
LAMP1P11279 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMP1P11279 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMP1P11279 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMP1P11279 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMP1P11279 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMP1P11279 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMP1P11279 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMP1P11279 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMP1P11279 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMP1P11279 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms