Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCAF4O95104 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCAF4O95104 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAF4O95104 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAF4O95104 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCAF4O95104 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCAF4O95104 Z92544.1-202ENST00000571933 1220 ntBASIC17.48■□□□□ 0.39
SCAF4O95104 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCAF4O95104 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCAF4O95104 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.48■□□□□ 0.39
SCAF4O95104 AC010542.4-201ENST00000563151 1910 ntBASIC17.48■□□□□ 0.39
SCAF4O95104 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.48■□□□□ 0.39
SCAF4O95104 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
SCAF4O95104 LINC01960-201ENST00000563759 1884 ntBASIC17.48■□□□□ 0.39
SCAF4O95104 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.48■□□□□ 0.39
SCAF4O95104 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SCAF4O95104 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.47■□□□□ 0.39
SCAF4O95104 MIR4787-201ENST00000607364 84 ntBASIC17.47■□□□□ 0.39
SCAF4O95104 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.47■□□□□ 0.39
SCAF4O95104 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCAF4O95104 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SCAF4O95104 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.46■□□□□ 0.39
SCAF4O95104 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.46■□□□□ 0.39
SCAF4O95104 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.46■□□□□ 0.39
SCAF4O95104 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.46■□□□□ 0.39
SCAF4O95104 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCAF4O95104 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.46■□□□□ 0.39
SCAF4O95104 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.45■□□□□ 0.38
SCAF4O95104 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SCAF4O95104 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.45■□□□□ 0.38
SCAF4O95104 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.45■□□□□ 0.38
SCAF4O95104 TSPY9P-201ENST00000440215 945 ntBASIC17.45■□□□□ 0.38
SCAF4O95104 TSPY11P-201ENST00000442607 1045 ntBASIC17.45■□□□□ 0.38
SCAF4O95104 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCAF4O95104 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCAF4O95104 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAF4O95104 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAF4O95104 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAF4O95104 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.44■□□□□ 0.38
SCAF4O95104 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.44■□□□□ 0.38
SCAF4O95104 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCAF4O95104 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAF4O95104 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.44■□□□□ 0.38
SCAF4O95104 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SCAF4O95104 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAF4O95104 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCAF4O95104 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCAF4O95104 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.43■□□□□ 0.38
SCAF4O95104 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAF4O95104 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 AC021242.3-201ENST00000607598 1377 ntBASIC17.43■□□□□ 0.38
SCAF4O95104 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAF4O95104 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAF4O95104 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCAF4O95104 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SCAF4O95104 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SCAF4O95104 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCAF4O95104 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SCAF4O95104 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCAF4O95104 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.42■□□□□ 0.38
SCAF4O95104 AL391422.3-201ENST00000603791 2761 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms