Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC33.8■■■■□ 3
PCF11O94913 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
PCF11O94913 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
PCF11O94913 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC33.8■■■■□ 3
PCF11O94913 METTL15-202ENST00000403099 795 ntTSL 5 BASIC33.8■■■■□ 3
PCF11O94913 AC098934.4-201ENST00000564127 592 ntBASIC33.8■■■■□ 3
PCF11O94913 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC33.8■■■■□ 3
PCF11O94913 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
PCF11O94913 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC33.79■■■■□ 3
PCF11O94913 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
PCF11O94913 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC33.79■■■■□ 3
PCF11O94913 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC33.79■■■■□ 3
PCF11O94913 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC33.79■■■■□ 3
PCF11O94913 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC33.79■■■■□ 3
PCF11O94913 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC33.79■■■■□ 3
PCF11O94913 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
PCF11O94913 FXN-202ENST00000396364 980 ntTSL 5 BASIC33.78■■■■□ 3
PCF11O94913 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC33.78■■■■□ 3
PCF11O94913 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC33.78■■■■□ 3
PCF11O94913 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC33.78■■■■□ 3
PCF11O94913 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
PCF11O94913 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.77■■■■□ 3
PCF11O94913 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC33.77■■■■□ 3
PCF11O94913 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
PCF11O94913 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.77■■■■□ 3
PCF11O94913 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC33.77■■■■□ 3
PCF11O94913 COMT-203ENST00000403184 2217 ntTSL 2 BASIC33.77■■■■□ 3
PCF11O94913 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.77■■■■□ 3
PCF11O94913 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC33.77■■■■□ 3
PCF11O94913 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC33.77■■■■□ 3
PCF11O94913 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
PCF11O94913 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
PCF11O94913 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC33.76■■■■□ 3
PCF11O94913 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC33.76■■■■□ 3
PCF11O94913 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
PCF11O94913 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC33.76■■■□□ 2.99
PCF11O94913 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
PCF11O94913 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
PCF11O94913 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
PCF11O94913 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC33.76■■■□□ 2.99
PCF11O94913 AC231657.2-201ENST00000624556 255 ntBASIC33.76■■■□□ 2.99
PCF11O94913 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
PCF11O94913 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC33.75■■■□□ 2.99
PCF11O94913 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC33.75■■■□□ 2.99
PCF11O94913 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 NAA20-201ENST00000310450 920 ntTSL 2 BASIC33.75■■■□□ 2.99
PCF11O94913 CYP2T1P-201ENST00000432607 1285 ntBASIC33.75■■■□□ 2.99
PCF11O94913 APTR-205ENST00000447009 902 ntTSL 2 BASIC33.75■■■□□ 2.99
PCF11O94913 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC33.75■■■□□ 2.99
PCF11O94913 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC33.75■■■□□ 2.99
PCF11O94913 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCF11O94913 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
PCF11O94913 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
PCF11O94913 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC33.74■■■□□ 2.99
PCF11O94913 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC33.74■■■□□ 2.99
PCF11O94913 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
PCF11O94913 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
PCF11O94913 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC33.74■■■□□ 2.99
PCF11O94913 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
PCF11O94913 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC33.73■■■□□ 2.99
PCF11O94913 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
PCF11O94913 APTR-203ENST00000430801 583 ntTSL 5 BASIC33.73■■■□□ 2.99
PCF11O94913 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC33.73■■■□□ 2.99
PCF11O94913 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
PCF11O94913 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC33.73■■■□□ 2.99
PCF11O94913 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
PCF11O94913 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC33.73■■■□□ 2.99
PCF11O94913 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
PCF11O94913 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC33.72■■■□□ 2.99
PCF11O94913 AC142086.2-201ENST00000569753 217 ntBASIC33.72■■■□□ 2.99
PCF11O94913 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.72■■■□□ 2.99
PCF11O94913 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
PCF11O94913 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC33.72■■■□□ 2.99
PCF11O94913 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC33.72■■■□□ 2.99
PCF11O94913 AC005181.1-201ENST00000604782 1256 ntBASIC33.72■■■□□ 2.99
PCF11O94913 AC010536.3-201ENST00000620306 533 ntBASIC33.72■■■□□ 2.99
PCF11O94913 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC33.71■■■□□ 2.99
PCF11O94913 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC33.71■■■□□ 2.99
PCF11O94913 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
PCF11O94913 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
PCF11O94913 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC33.71■■■□□ 2.99
PCF11O94913 MDK-213ENST00000617138 635 ntTSL 2 BASIC33.71■■■□□ 2.99
PCF11O94913 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC33.71■■■□□ 2.99
PCF11O94913 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC33.7■■■□□ 2.99
PCF11O94913 PARP1-210ENST00000629232 477 ntTSL 5 BASIC33.7■■■□□ 2.99
PCF11O94913 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
PCF11O94913 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
PCF11O94913 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
PCF11O94913 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
PCF11O94913 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
PCF11O94913 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.69■■■□□ 2.98
PCF11O94913 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC33.69■■■□□ 2.98
PCF11O94913 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC33.69■■■□□ 2.98
PCF11O94913 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.69■■■□□ 2.98
PCF11O94913 AC139530.1-201ENST00000575312 1977 ntBASIC33.69■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms