Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.1■□□□□ 0.97
C4orf47A7E2U8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 CYP2T1P-201ENST00000432607 1285 ntBASIC21.09■□□□□ 0.97
C4orf47A7E2U8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 KRT18P20-201ENST00000548986 1279 ntBASIC21.09■□□□□ 0.97
C4orf47A7E2U8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 AC068338.2-201ENST00000563278 1430 ntBASIC21.09■□□□□ 0.97
C4orf47A7E2U8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.09■□□□□ 0.97
C4orf47A7E2U8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 AC010141.2-201ENST00000452426 721 ntBASIC21.08■□□□□ 0.97
C4orf47A7E2U8 TERF1P5-201ENST00000477545 1207 ntBASIC21.08■□□□□ 0.97
C4orf47A7E2U8 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 AC142381.4-202ENST00000563973 229 ntBASIC21.08■□□□□ 0.97
C4orf47A7E2U8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.08■□□□□ 0.97
C4orf47A7E2U8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
C4orf47A7E2U8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 AC092118.2-201ENST00000613495 667 ntBASIC21.07■□□□□ 0.96
C4orf47A7E2U8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C4orf47A7E2U8 AL353803.4-201ENST00000565882 1934 ntBASIC21.07■□□□□ 0.96
C4orf47A7E2U8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.06■□□□□ 0.96
C4orf47A7E2U8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.06■□□□□ 0.96
C4orf47A7E2U8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 AC138907.5-202ENST00000569484 235 ntBASIC21.05■□□□□ 0.96
C4orf47A7E2U8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 AC006058.3-201ENST00000606217 1069 ntBASIC21.05■□□□□ 0.96
C4orf47A7E2U8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 OR10C1-204ENST00000622521 1039 ntBASIC21.05■□□□□ 0.96
C4orf47A7E2U8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C4orf47A7E2U8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 AC093787.1-201ENST00000450396 207 ntBASIC21.04■□□□□ 0.96
C4orf47A7E2U8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 AC008694.1-202ENST00000636953 945 ntBASIC21.04■□□□□ 0.96
C4orf47A7E2U8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms