Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 AL391422.3-201ENST00000603791 2761 ntBASIC15.23■□□□□ 0.03
LINC01546A6NGU7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01546A6NGU7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 AC019171.1-201ENST00000601251 1056 ntBASIC15.22■□□□□ 0.03
LINC01546A6NGU7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01546A6NGU7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 AC004687.1-201ENST00000579003 1625 ntBASIC15.21■□□□□ 0.03
LINC01546A6NGU7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
LINC01546A6NGU7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 BX323043.1-201ENST00000641006 1765 ntBASIC15.21■□□□□ 0.02
LINC01546A6NGU7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
LINC01546A6NGU7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 AC006128.1-201ENST00000624704 1661 ntBASIC15.2■□□□□ 0.02
LINC01546A6NGU7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01546A6NGU7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 AL592293.1-201ENST00000502889 1188 ntBASIC15.19■□□□□ 0.02
LINC01546A6NGU7 AFG3L1P-217ENST00000557444 2447 ntBASIC15.19■□□□□ 0.02
LINC01546A6NGU7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01546A6NGU7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms