Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 EEF1DP3-203ENST00000566025 782 ntBASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
LOC102724428A0A0B4J2F2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.64■■■□□ 2.01
LOC102724428A0A0B4J2F2 LINC01960-201ENST00000563759 1884 ntBASIC27.64■■■□□ 2.01
LOC102724428A0A0B4J2F2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.63■■■□□ 2.01
LOC102724428A0A0B4J2F2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 AC093787.1-201ENST00000450396 207 ntBASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 OR10C1-204ENST00000622521 1039 ntBASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
LOC102724428A0A0B4J2F2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 AC092118.2-201ENST00000613495 667 ntBASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LOC102724428A0A0B4J2F2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
LOC102724428A0A0B4J2F2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 AC053503.5-201ENST00000601508 636 ntBASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LOC102724428A0A0B4J2F2 ANOS2P-203ENST00000472227 1816 ntBASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 AL512625.2-201ENST00000417533 625 ntBASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 AC016405.3-201ENST00000607710 860 ntBASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.58■■■□□ 2.01
LOC102724428A0A0B4J2F2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
LOC102724428A0A0B4J2F2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 RPS2P52-201ENST00000469610 820 ntBASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.56■■■□□ 2
LOC102724428A0A0B4J2F2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 AC083880.1-201ENST00000608266 535 ntBASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
LOC102724428A0A0B4J2F2 OR7E47P-201ENST00000546390 1422 ntBASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms