Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
IGKV2-28A0A075B6P5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
IGKV2-28A0A075B6P5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 AL033527.3-201ENST00000566366 1196 ntBASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGKV2-28A0A075B6P5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 AC138932.1-201ENST00000534164 6830 ntBASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 AC007952.6-201ENST00000573168 2673 ntBASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 AC003957.1-201ENST00000625108 2673 ntBASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 YBX1P4-201ENST00000392794 808 ntBASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IGKV2-28A0A075B6P5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IGKV2-28A0A075B6P5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms