Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MIR6753-201ENST00000617169 164 ntBASIC12.45□□□□□ -0.42
MTHFRP42898 NCF4-AS1-202ENST00000619915 995 ntTSL 4 BASIC12.45□□□□□ -0.42
MTHFRP42898 CU638689.3-201ENST00000624266 1031 ntBASIC12.45□□□□□ -0.42
MTHFRP42898 AC006974.2-201ENST00000637240 1227 ntTSL 5 BASIC12.45□□□□□ -0.42
MTHFRP42898 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.45□□□□□ -0.42
MTHFRP42898 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MTHFRP42898 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
MTHFRP42898 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.45□□□□□ -0.42
MTHFRP42898 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MTHFRP42898 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MTHFRP42898 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC12.45□□□□□ -0.42
MTHFRP42898 RIBC1-204ENST00000457095 1949 ntTSL 2 BASIC12.45□□□□□ -0.42
MTHFRP42898 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 APOL4-202ENST00000332987 1825 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 GIMAP5-207ENST00000498181 1835 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
MTHFRP42898 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 ELF5-206ENST00000620316 2217 ntTSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 OR6F1-201ENST00000302084 1061 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
MTHFRP42898 MGST3-201ENST00000367883 706 ntTSL 3 BASIC12.44□□□□□ -0.42
MTHFRP42898 SRMP1-201ENST00000398959 885 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC12.44□□□□□ -0.42
MTHFRP42898 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 AL513523.3-201ENST00000434575 316 ntTSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 ARSDP1-201ENST00000443820 1215 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 NME6-211ENST00000447314 621 ntTSL 3 BASIC12.44□□□□□ -0.42
MTHFRP42898 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC12.44□□□□□ -0.42
MTHFRP42898 E2F6P4-201ENST00000468625 514 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 LSP1P2-201ENST00000479042 133 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 SOX2-OT-212ENST00000491282 882 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 TOMM22P3-201ENST00000498134 345 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 SNORA50B-201ENST00000517198 135 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 Metazoa_SRP.51-201ENST00000570437 272 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 RN7SL784P-201ENST00000577319 342 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC12.44□□□□□ -0.42
MTHFRP42898 Vax2os1_3.1-201ENST00000622578 197 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 AC243547.3-202ENST00000625258 192 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 SNORA50B-202ENST00000630737 137 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 AC244226.1-201ENST00000631943 402 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
MTHFRP42898 AP000553.4-201ENST00000641967 471 ntBASIC12.44□□□□□ -0.42
MTHFRP42898 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 ZC3HC1-209ENST00000481503 1741 ntTSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
MTHFRP42898 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
MTHFRP42898 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
MTHFRP42898 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC12.44□□□□□ -0.42
MTHFRP42898 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12.43□□□□□ -0.42
MTHFRP42898 STRADA-203ENST00000375840 2209 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 LINC00663-201ENST00000586645 1357 ntTSL 2 BASIC12.43□□□□□ -0.42
MTHFRP42898 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC12.43□□□□□ -0.42
MTHFRP42898 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 CAPN9-203ENST00000366666 2173 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 AL118505.1-201ENST00000619370 1932 ntBASIC12.43□□□□□ -0.42
MTHFRP42898 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC12.43□□□□□ -0.42
MTHFRP42898 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
MTHFRP42898 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
MTHFRP42898 LPP-AS2-201ENST00000605573 2852 ntBASIC12.43□□□□□ -0.42
MTHFRP42898 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
MTHFRP42898 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC12.43□□□□□ -0.42
MTHFRP42898 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC12.43□□□□□ -0.42
MTHFRP42898 PRAMEF36P-202ENST00000448180 1452 ntBASIC12.43□□□□□ -0.42
MTHFRP42898 AC104852.1-201ENST00000518921 1459 ntBASIC12.43□□□□□ -0.42
MTHFRP42898 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 EXOSC1-204ENST00000370902 923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MTHFRP42898 TPTE2P5-201ENST00000379515 450 ntTSL 5 BASIC12.43□□□□□ -0.42
MTHFRP42898 KRTAP2-1-201ENST00000391419 776 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
MTHFRP42898 RPL23-204ENST00000394333 444 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms