Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 AC079154.1-201ENST00000438816 542 ntTSL 4 BASIC10.95□□□□□ -0.66
P04436 AL158824.1-201ENST00000451825 450 ntBASIC10.95□□□□□ -0.66
P04436 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC10.95□□□□□ -0.66
P04436 ITIH4-AS1-201ENST00000478366 395 ntTSL 3 BASIC10.95□□□□□ -0.66
P04436 AK2-206ENST00000480134 811 ntTSL 2 BASIC10.95□□□□□ -0.66
P04436 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 AC010442.2-201ENST00000509301 407 ntBASIC10.95□□□□□ -0.66
P04436 AP003717.2-201ENST00000534962 898 ntBASIC10.95□□□□□ -0.66
P04436 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC10.95□□□□□ -0.66
P04436 CCDC32-204ENST00000558750 814 ntTSL 5 BASIC10.95□□□□□ -0.66
P04436 GABARAP-203ENST00000571129 568 ntTSL 2 BASIC10.95□□□□□ -0.66
P04436 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC10.95□□□□□ -0.66
P04436 NAT9-219ENST00000582524 573 ntTSL 4 BASIC10.95□□□□□ -0.66
P04436 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC10.95□□□□□ -0.66
P04436 LINC01828-205ENST00000594329 863 ntTSL 5 BASIC10.95□□□□□ -0.66
P04436 AL157791.2-201ENST00000604758 478 ntBASIC10.95□□□□□ -0.66
P04436 AP006248.1-201ENST00000610471 67 ntBASIC10.95□□□□□ -0.66
P04436 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC10.95□□□□□ -0.66
P04436 PCDHGA8-201ENST00000398604 4605 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
P04436 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
P04436 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC10.95□□□□□ -0.66
P04436 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
P04436 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
P04436 SHC4-201ENST00000332408 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC10.95□□□□□ -0.66
P04436 KCNA2-207ENST00000638532 2426 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P04436 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.95□□□□□ -0.66
P04436 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC10.95□□□□□ -0.66
P04436 ARL6-201ENST00000335979 1630 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P04436 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P04436 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.94□□□□□ -0.66
P04436 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 NPAP1P3-201ENST00000432327 1586 ntBASIC10.94□□□□□ -0.66
P04436 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 FP565171.1-201ENST00000634373 1535 ntTSL 5 BASIC10.94□□□□□ -0.66
P04436 FGD3-202ENST00000375482 3321 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC10.94□□□□□ -0.66
P04436 AC106818.1-201ENST00000623223 3242 ntBASIC10.94□□□□□ -0.66
P04436 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
P04436 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC10.94□□□□□ -0.66
P04436 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
P04436 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 PDK3-202ENST00000441463 1921 ntTSL 2 BASIC10.94□□□□□ -0.66
P04436 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
P04436 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.94□□□□□ -0.66
P04436 AL357054.4-201ENST00000606285 2814 ntBASIC10.94□□□□□ -0.66
P04436 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 PROKR2-201ENST00000217270 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
P04436 TTC32-202ENST00000402414 735 ntTSL 5 BASIC10.94□□□□□ -0.66
P04436 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC10.94□□□□□ -0.66
P04436 AC005730.1-201ENST00000434406 344 ntBASIC10.94□□□□□ -0.66
P04436 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC10.94□□□□□ -0.66
P04436 AL450326.1-201ENST00000442526 760 ntTSL 2 BASIC10.94□□□□□ -0.66
P04436 RN7SL487P-201ENST00000468140 344 ntBASIC10.94□□□□□ -0.66
P04436 PDLIM5-208ENST00000504489 538 ntTSL 4 BASIC10.94□□□□□ -0.66
P04436 KBTBD11-OT1-201ENST00000518539 815 ntTSL 3 BASIC10.94□□□□□ -0.66
P04436 AP006287.1-201ENST00000533995 653 ntBASIC10.94□□□□□ -0.66
P04436 ACRBP-204ENST00000536350 1053 ntTSL 2 BASIC10.94□□□□□ -0.66
P04436 ABHD17C-205ENST00000560609 627 ntTSL 4 BASIC10.94□□□□□ -0.66
P04436 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC10.94□□□□□ -0.66
P04436 snoZ6.3-201ENST00000583496 76 ntBASIC10.94□□□□□ -0.66
P04436 CTBP2P7-201ENST00000593270 1244 ntBASIC10.94□□□□□ -0.66
P04436 AC026367.1-201ENST00000605329 611 ntTSL 2 BASIC10.94□□□□□ -0.66
P04436 PINLYP-207ENST00000612042 914 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
P04436 AC008735.4-201ENST00000614815 608 ntBASIC10.94□□□□□ -0.66
P04436 AC080038.2-201ENST00000617734 423 ntBASIC10.94□□□□□ -0.66
P04436 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 THAP1-201ENST00000254250 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
P04436 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 AC007610.4-201ENST00000623307 2125 ntBASIC10.94□□□□□ -0.66
P04436 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
P04436 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
P04436 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC10.94□□□□□ -0.66
P04436 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms