RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.5
SHC4-201ENST00000332408 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
SHC4-201ENST00000332408 ABCC9O60706 1549 aa21.51■■□□□ 1.03
SHC4-201ENST00000332408 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
SHC4-201ENST00000332408 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
SHC4-201ENST00000332408 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
SHC4-201ENST00000332408 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
SHC4-201ENST00000332408 NACADO15069 1562 aa20.39■□□□□ 0.85
SHC4-201ENST00000332408 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
SHC4-201ENST00000332408 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
SHC4-201ENST00000332408 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
SHC4-201ENST00000332408 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
SHC4-201ENST00000332408 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
SHC4-201ENST00000332408 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
SHC4-201ENST00000332408 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
SHC4-201ENST00000332408 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
SHC4-201ENST00000332408 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
SHC4-201ENST00000332408 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
SHC4-201ENST00000332408 SMARCA2P51531 1590 aa19.07■□□□□ 0.64
SHC4-201ENST00000332408 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
SHC4-201ENST00000332408 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
SHC4-201ENST00000332408 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
SHC4-201ENST00000332408 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
SHC4-201ENST00000332408 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
SHC4-201ENST00000332408 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
SHC4-201ENST00000332408 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
SHC4-201ENST00000332408 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
SHC4-201ENST00000332408 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
SHC4-201ENST00000332408 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
SHC4-201ENST00000332408 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
SHC4-201ENST00000332408 FBLN2P98095 1184 aa18.72■□□□□ 0.59
SHC4-201ENST00000332408 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
SHC4-201ENST00000332408 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
SHC4-201ENST00000332408 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
SHC4-201ENST00000332408 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
SHC4-201ENST00000332408 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
SHC4-201ENST00000332408 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
SHC4-201ENST00000332408 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
SHC4-201ENST00000332408 WIZO95785 1651 aa18.42■□□□□ 0.54
SHC4-201ENST00000332408 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
SHC4-201ENST00000332408 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
SHC4-201ENST00000332408 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
SHC4-201ENST00000332408 TTBK1Q5TCY1 1321 aaPredicted RBP18.35■□□□□ 0.53
SHC4-201ENST00000332408 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.53
SHC4-201ENST00000332408 APLP2Q06481 763 aa18.31■□□□□ 0.52
SHC4-201ENST00000332408 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
SHC4-201ENST00000332408 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
SHC4-201ENST00000332408 LAMC3Q9Y6N6 1575 aa18.26■□□□□ 0.51
SHC4-201ENST00000332408 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
SHC4-201ENST00000332408 NESP48681 1621 aa18.23■□□□□ 0.51
SHC4-201ENST00000332408 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
SHC4-201ENST00000332408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
SHC4-201ENST00000332408 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
SHC4-201ENST00000332408 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
SHC4-201ENST00000332408 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
SHC4-201ENST00000332408 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
SHC4-201ENST00000332408 SOGA1O94964 1423 aa18.15■□□□□ 0.5
SHC4-201ENST00000332408 CFTRP13569 1480 aa18.15■□□□□ 0.5
SHC4-201ENST00000332408 CUX2O14529 1486 aa18.08■□□□□ 0.49
SHC4-201ENST00000332408 KIF27Q86VH2 1401 aa18.03■□□□□ 0.48
SHC4-201ENST00000332408 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.48
SHC4-201ENST00000332408 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
SHC4-201ENST00000332408 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
SHC4-201ENST00000332408 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
SHC4-201ENST00000332408 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
SHC4-201ENST00000332408 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
SHC4-201ENST00000332408 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
SHC4-201ENST00000332408 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
SHC4-201ENST00000332408 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
SHC4-201ENST00000332408 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
SHC4-201ENST00000332408 EEA1Q15075 1411 aa17.79■□□□□ 0.44
SHC4-201ENST00000332408 GAPVD1Q14C86 1478 aa17.79■□□□□ 0.44
SHC4-201ENST00000332408 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.44
SHC4-201ENST00000332408 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
SHC4-201ENST00000332408 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.44
SHC4-201ENST00000332408 GRIN2BQ13224 1484 aa17.77■□□□□ 0.44
SHC4-201ENST00000332408 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
SHC4-201ENST00000332408 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
SHC4-201ENST00000332408 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
SHC4-201ENST00000332408 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
SHC4-201ENST00000332408 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
SHC4-201ENST00000332408 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
SHC4-201ENST00000332408 ARID3CA6NKF2 412 aa17.65■□□□□ 0.42
SHC4-201ENST00000332408 WDR62O43379 1518 aa17.64■□□□□ 0.41
SHC4-201ENST00000332408 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
SHC4-201ENST00000332408 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
SHC4-201ENST00000332408 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.4
SHC4-201ENST00000332408 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
SHC4-201ENST00000332408 CUX1P39880 1505 aa17.55■□□□□ 0.4
SHC4-201ENST00000332408 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
SHC4-201ENST00000332408 PLEKHD1A6NEE1 506 aa17.55■□□□□ 0.4
SHC4-201ENST00000332408 KCNH8Q96L42 1107 aa17.53■□□□□ 0.4
SHC4-201ENST00000332408 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
SHC4-201ENST00000332408 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
SHC4-201ENST00000332408 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
SHC4-201ENST00000332408 ESF1Q9H501 851 aaKnown RBP17.49■□□□□ 0.39
SHC4-201ENST00000332408 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
SHC4-201ENST00000332408 PTPRGP23470 1445 aa17.46■□□□□ 0.39
SHC4-201ENST00000332408 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
SHC4-201ENST00000332408 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms