Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RN7SL521P-201ENST00000488398 297 ntBASIC10.98□□□□□ -0.65
P04436 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 AC016924.1-202ENST00000512435 447 ntTSL 3 BASIC10.98□□□□□ -0.65
P04436 LINC00290-201ENST00000512487 593 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC10.98□□□□□ -0.65
P04436 CETN3-204ENST00000522565 867 ntTSL 2 BASIC10.98□□□□□ -0.65
P04436 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC10.98□□□□□ -0.65
P04436 MIR3183-201ENST00000578566 84 ntBASIC10.98□□□□□ -0.65
P04436 CIAPIN1P-201ENST00000584883 931 ntBASIC10.98□□□□□ -0.65
P04436 SDHDP1-201ENST00000588055 474 ntBASIC10.98□□□□□ -0.65
P04436 FAM223B-202ENST00000598177 713 ntBASIC10.98□□□□□ -0.65
P04436 BNIP3P20-201ENST00000604827 578 ntBASIC10.98□□□□□ -0.65
P04436 AC147067.2-201ENST00000608161 289 ntBASIC10.98□□□□□ -0.65
P04436 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
P04436 PRSS1-207ENST00000619214 787 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 FAM223A-202ENST00000625204 713 ntBASIC10.98□□□□□ -0.65
P04436 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 AC012442.3-201ENST00000636053 940 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 CLDN4-203ENST00000435050 4163 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
P04436 CD83-202ENST00000612003 2307 ntTSL 4 BASIC10.98□□□□□ -0.65
P04436 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 HPD-201ENST00000289004 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 CCNB3P1-201ENST00000504855 1431 ntBASIC10.98□□□□□ -0.65
P04436 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 SLC17A2-201ENST00000265425 1493 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
P04436 AC008659.1-201ENST00000501834 1458 ntTSL 3 BASIC10.98□□□□□ -0.65
P04436 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 TYRO3P-201ENST00000558165 2705 ntBASIC10.98□□□□□ -0.65
P04436 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
P04436 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04436 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.98□□□□□ -0.65
P04436 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 AC027801.1-201ENST00000376609 2100 ntTSL 2 BASIC10.97□□□□□ -0.65
P04436 SPATA33-201ENST00000301031 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 AL021877.1-201ENST00000457251 2194 ntBASIC10.97□□□□□ -0.65
P04436 STAT5A-209ENST00000588868 3629 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
P04436 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
P04436 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P04436 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 SYT17-202ENST00000562034 5092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 RN7SKP90-201ENST00000363013 335 ntBASIC10.97□□□□□ -0.65
P04436 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
P04436 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 FAM238B-202ENST00000423917 1220 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 AC009305.1-201ENST00000449780 368 ntTSL 2 BASIC10.97□□□□□ -0.65
P04436 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC10.97□□□□□ -0.65
P04436 AL132656.1-201ENST00000452173 490 ntBASIC10.97□□□□□ -0.65
P04436 AL157413.1-201ENST00000458461 823 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 AC068298.1-201ENST00000465165 161 ntBASIC10.97□□□□□ -0.65
P04436 RN7SL148P-201ENST00000467120 279 ntBASIC10.97□□□□□ -0.65
P04436 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC10.97□□□□□ -0.65
P04436 SNORA74.2-201ENST00000516496 180 ntBASIC10.97□□□□□ -0.65
P04436 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC10.97□□□□□ -0.65
P04436 OR10V2P-201ENST00000525296 764 ntBASIC10.97□□□□□ -0.65
P04436 CD63-212ENST00000552067 621 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 RABGGTA-218ENST00000560777 1197 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 AC005086.1-201ENST00000566572 801 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC10.97□□□□□ -0.65
P04436 AC091132.3-201ENST00000579701 470 ntBASIC10.97□□□□□ -0.65
P04436 AC138645.1-201ENST00000582765 470 ntBASIC10.97□□□□□ -0.65
P04436 AL121658.1-201ENST00000608489 712 ntBASIC10.97□□□□□ -0.65
P04436 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC10.97□□□□□ -0.65
P04436 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC10.97□□□□□ -0.65
P04436 AC010335.3-201ENST00000623767 531 ntBASIC10.97□□□□□ -0.65
P04436 AC019197.1-210ENST00000625505 758 ntTSL 5 BASIC10.97□□□□□ -0.65
P04436 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 SIGLEC6-206ENST00000436458 1713 ntTSL 2 BASIC10.97□□□□□ -0.65
P04436 AL035448.1-201ENST00000439529 1831 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 AC004847.1-201ENST00000568457 1911 ntBASIC10.97□□□□□ -0.65
P04436 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04436 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms