Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3Q9UBI1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD3Q9UBI1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD3Q9UBI1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD3Q9UBI1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD3Q9UBI1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 AC004448.1-201ENST00000458332 883 ntBASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 AL592293.1-201ENST00000502889 1188 ntBASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
COMMD3Q9UBI1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.88■□□□□ 0.61
COMMD3Q9UBI1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 LINC01529-204ENST00000636474 1715 ntBASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COMMD3Q9UBI1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COMMD3Q9UBI1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 AL391422.3-201ENST00000603791 2761 ntBASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 GPX1-201ENST00000419349 1106 ntBASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD3Q9UBI1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD3Q9UBI1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms