Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCM2Q9BSQ5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCM2Q9BSQ5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCM2Q9BSQ5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
CCM2Q9BSQ5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.2■□□□□ 0.99
CCM2Q9BSQ5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 AL034346.1-201ENST00000568244 1277 ntBASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 AP004607.7-201ENST00000527152 1677 ntBASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.2■□□□□ 0.98
CCM2Q9BSQ5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 BX005040.4-201ENST00000637145 1518 ntBASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 AC027612.3-201ENST00000413684 1047 ntBASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 MIR6084-201ENST00000622012 110 ntBASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCM2Q9BSQ5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 AC092053.2-201ENST00000640557 1818 ntBASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.18■□□□□ 0.98
CCM2Q9BSQ5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCM2Q9BSQ5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCM2Q9BSQ5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 MIR935-201ENST00000401179 91 ntBASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 CLDN5-201ENST00000403084 2357 ntBASIC21.15■□□□□ 0.98
CCM2Q9BSQ5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CCM2Q9BSQ5 AC009237.3-201ENST00000393279 1427 ntBASIC21.14■□□□□ 0.98
CCM2Q9BSQ5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.14■□□□□ 0.97
CCM2Q9BSQ5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms