Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.64■■□□□ 1.85
CRAMP1Q96RY5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CRAMP1Q96RY5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.64■■□□□ 1.85
CRAMP1Q96RY5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CRAMP1Q96RY5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CRAMP1Q96RY5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.63■■□□□ 1.85
CRAMP1Q96RY5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 LINC01960-201ENST00000563759 1884 ntBASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CRAMP1Q96RY5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 AC098934.4-201ENST00000564127 592 ntBASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 AC013268.1-206ENST00000638368 961 ntBASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 AC112229.1-201ENST00000639295 961 ntBASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CRAMP1Q96RY5 TERF1P5-201ENST00000477545 1207 ntBASIC26.6■■□□□ 1.85
CRAMP1Q96RY5 EEF1DP3-203ENST00000566025 782 ntBASIC26.6■■□□□ 1.85
CRAMP1Q96RY5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CRAMP1Q96RY5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.59■■□□□ 1.85
CRAMP1Q96RY5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 FAM201B-201ENST00000458407 597 ntBASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CRAMP1Q96RY5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 AC068338.2-201ENST00000563278 1430 ntBASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CRAMP1Q96RY5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 AL034346.1-201ENST00000568244 1277 ntBASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 MIR4758-201ENST00000577688 71 ntBASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 AC053503.5-201ENST00000601508 636 ntBASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 OR7E47P-201ENST00000546390 1422 ntBASIC26.56■■□□□ 1.84
CRAMP1Q96RY5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 AC007322.4-201ENST00000509611 723 ntBASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CRAMP1Q96RY5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CRAMP1Q96RY5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CRAMP1Q96RY5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms