Protein–RNA interactions for Protein: Q96NR8

RDH12, Retinol dehydrogenase 12, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12Q96NR8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RDH12Q96NR8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RDH12Q96NR8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RDH12Q96NR8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RDH12Q96NR8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.8■□□□□ 0.76
RDH12Q96NR8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RDH12Q96NR8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.8■□□□□ 0.76
RDH12Q96NR8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.8■□□□□ 0.76
RDH12Q96NR8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RDH12Q96NR8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
RDH12Q96NR8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RDH12Q96NR8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RDH12Q96NR8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RDH12Q96NR8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RDH12Q96NR8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RDH12Q96NR8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 SNX5-217ENST00000606557 1087 ntBASIC19.79■□□□□ 0.76
RDH12Q96NR8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 AC004687.1-201ENST00000579003 1625 ntBASIC19.79■□□□□ 0.76
RDH12Q96NR8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RDH12Q96NR8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RDH12Q96NR8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RDH12Q96NR8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.77■□□□□ 0.76
RDH12Q96NR8 C17orf82-201ENST00000623772 1530 ntBASIC19.77■□□□□ 0.76
RDH12Q96NR8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.77■□□□□ 0.76
RDH12Q96NR8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RDH12Q96NR8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.77■□□□□ 0.76
RDH12Q96NR8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RDH12Q96NR8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RDH12Q96NR8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RDH12Q96NR8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RDH12Q96NR8 AC129492.7-201ENST00000622992 756 ntBASIC19.77■□□□□ 0.76
RDH12Q96NR8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.77■□□□□ 0.75
RDH12Q96NR8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RDH12Q96NR8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.77■□□□□ 0.75
RDH12Q96NR8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.77■□□□□ 0.75
RDH12Q96NR8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RDH12Q96NR8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 AC007952.6-201ENST00000573168 2673 ntBASIC19.76■□□□□ 0.75
RDH12Q96NR8 AC003957.1-201ENST00000625108 2673 ntBASIC19.76■□□□□ 0.75
RDH12Q96NR8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.76■□□□□ 0.75
RDH12Q96NR8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RDH12Q96NR8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 MIR4449-201ENST00000578365 66 ntBASIC19.76■□□□□ 0.75
RDH12Q96NR8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.76■□□□□ 0.75
RDH12Q96NR8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.76■□□□□ 0.75
RDH12Q96NR8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RDH12Q96NR8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RDH12Q96NR8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RDH12Q96NR8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RDH12Q96NR8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RDH12Q96NR8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RDH12Q96NR8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RDH12Q96NR8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RDH12Q96NR8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.75■□□□□ 0.75
RDH12Q96NR8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.75■□□□□ 0.75
RDH12Q96NR8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RDH12Q96NR8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RDH12Q96NR8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
RDH12Q96NR8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RDH12Q96NR8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.74■□□□□ 0.75
RDH12Q96NR8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RDH12Q96NR8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms