Protein–RNA interactions for Protein: Q96KK3

KCNS1, Potassium voltage-gated channel subfamily S member 1, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS1Q96KK3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 AC144652.1-201ENST00000609974 1624 ntBASIC16.34■□□□□ 0.21
KCNS1Q96KK3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.34■□□□□ 0.21
KCNS1Q96KK3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
KCNS1Q96KK3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KCNS1Q96KK3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
KCNS1Q96KK3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 AC012354.3-201ENST00000623734 483 ntBASIC16.33■□□□□ 0.2
KCNS1Q96KK3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.33■□□□□ 0.2
KCNS1Q96KK3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 SNX5-217ENST00000606557 1087 ntBASIC16.32■□□□□ 0.2
KCNS1Q96KK3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
KCNS1Q96KK3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KCNS1Q96KK3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNS1Q96KK3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 AC137630.3-201ENST00000607245 391 ntBASIC16.29■□□□□ 0.2
KCNS1Q96KK3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KCNS1Q96KK3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.28■□□□□ 0.2
KCNS1Q96KK3 AC005703.6-201ENST00000623265 1329 ntBASIC16.28■□□□□ 0.2
KCNS1Q96KK3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KCNS1Q96KK3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms