Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEH1LQ96EE3 AC008406.3-201ENST00000620001 1374 ntBASIC18.68■□□□□ 0.58
SEH1LQ96EE3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SEH1LQ96EE3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SEH1LQ96EE3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEH1LQ96EE3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.66■□□□□ 0.58
SEH1LQ96EE3 pRNA.6-201ENST00000610482 90 ntBASIC18.66■□□□□ 0.58
SEH1LQ96EE3 pRNA.5-201ENST00000612139 90 ntBASIC18.66■□□□□ 0.58
SEH1LQ96EE3 pRNA.11-201ENST00000618423 90 ntBASIC18.66■□□□□ 0.58
SEH1LQ96EE3 pRNA.13-201ENST00000619112 90 ntBASIC18.66■□□□□ 0.58
SEH1LQ96EE3 AC004687.1-201ENST00000579003 1625 ntBASIC18.66■□□□□ 0.58
SEH1LQ96EE3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SEH1LQ96EE3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.66■□□□□ 0.58
SEH1LQ96EE3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
SEH1LQ96EE3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 AC241377.3-202ENST00000626088 1088 ntBASIC18.65■□□□□ 0.58
SEH1LQ96EE3 AC241585.3-202ENST00000628937 1088 ntBASIC18.65■□□□□ 0.58
SEH1LQ96EE3 AC245100.8-202ENST00000629247 1058 ntBASIC18.65■□□□□ 0.58
SEH1LQ96EE3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEH1LQ96EE3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SEH1LQ96EE3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SEH1LQ96EE3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEH1LQ96EE3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 MIR3181-201ENST00000578512 73 ntBASIC18.63■□□□□ 0.57
SEH1LQ96EE3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
SEH1LQ96EE3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEH1LQ96EE3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEH1LQ96EE3 AC073130.3-201ENST00000624389 2278 ntBASIC18.62■□□□□ 0.57
SEH1LQ96EE3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SEH1LQ96EE3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.62■□□□□ 0.57
SEH1LQ96EE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEH1LQ96EE3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEH1LQ96EE3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms