Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 AC092028.1-203ENST00000608262 953 ntBASIC20.64■□□□□ 0.89
RNF220Q5VTB9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF220Q5VTB9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.62■□□□□ 0.89
RNF220Q5VTB9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF220Q5VTB9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 AL020996.1-203ENST00000536896 2307 ntBASIC20.61■□□□□ 0.89
RNF220Q5VTB9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 AC010542.4-201ENST00000563151 1910 ntBASIC20.61■□□□□ 0.89
RNF220Q5VTB9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF220Q5VTB9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 AL353803.4-201ENST00000565882 1934 ntBASIC20.6■□□□□ 0.89
RNF220Q5VTB9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF220Q5VTB9 AC144652.1-201ENST00000609974 1624 ntBASIC20.6■□□□□ 0.89
RNF220Q5VTB9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF220Q5VTB9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF220Q5VTB9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF220Q5VTB9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF220Q5VTB9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF220Q5VTB9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF220Q5VTB9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF220Q5VTB9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RNF220Q5VTB9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF220Q5VTB9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms