Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC29.83■■■□□ 2.37
CDCA8Q53HL2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDCA8Q53HL2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
CDCA8Q53HL2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDCA8Q53HL2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDCA8Q53HL2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CDCA8Q53HL2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 AP004607.4-201ENST00000530158 1459 ntBASIC29.81■■■□□ 2.36
CDCA8Q53HL2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 FXN-202ENST00000396364 980 ntTSL 5 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 AC092666.2-201ENST00000613287 246 ntBASIC29.81■■■□□ 2.36
CDCA8Q53HL2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CDCA8Q53HL2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 AP006587.3-201ENST00000525742 1516 ntBASIC29.8■■■□□ 2.36
CDCA8Q53HL2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDCA8Q53HL2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CDCA8Q53HL2 KRT87P-202ENST00000534226 1464 ntBASIC29.79■■■□□ 2.36
CDCA8Q53HL2 AC080038.3-201ENST00000623346 1952 ntBASIC29.79■■■□□ 2.36
CDCA8Q53HL2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CDCA8Q53HL2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
CDCA8Q53HL2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
CDCA8Q53HL2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC29.78■■■□□ 2.36
CDCA8Q53HL2 AC022517.1-201ENST00000592429 346 ntBASIC29.78■■■□□ 2.36
CDCA8Q53HL2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CDCA8Q53HL2 AC004854.2-201ENST00000608450 1441 ntBASIC29.78■■■□□ 2.36
CDCA8Q53HL2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC29.78■■■□□ 2.36
CDCA8Q53HL2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.77■■■□□ 2.36
CDCA8Q53HL2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 KRT18P61-201ENST00000585825 1298 ntBASIC29.77■■■□□ 2.36
CDCA8Q53HL2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CDCA8Q53HL2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC29.76■■■□□ 2.36
CDCA8Q53HL2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC29.76■■■□□ 2.36
CDCA8Q53HL2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CDCA8Q53HL2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC29.76■■■□□ 2.35
CDCA8Q53HL2 AC092053.2-201ENST00000640557 1818 ntBASIC29.75■■■□□ 2.35
CDCA8Q53HL2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDCA8Q53HL2 AC068473.5-201ENST00000616428 2072 ntBASIC29.75■■■□□ 2.35
CDCA8Q53HL2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CDCA8Q53HL2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms