Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
PAX9P55771 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.29■□□□□ 0.36
PAX9P55771 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.29■□□□□ 0.36
PAX9P55771 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.29■□□□□ 0.36
PAX9P55771 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PAX9P55771 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.29■□□□□ 0.36
PAX9P55771 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAX9P55771 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PAX9P55771 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.28■□□□□ 0.36
PAX9P55771 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PAX9P55771 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAX9P55771 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.28■□□□□ 0.36
PAX9P55771 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAX9P55771 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAX9P55771 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.28■□□□□ 0.36
PAX9P55771 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PAX9P55771 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAX9P55771 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.28■□□□□ 0.36
PAX9P55771 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.28■□□□□ 0.36
PAX9P55771 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PAX9P55771 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
PAX9P55771 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.27■□□□□ 0.36
PAX9P55771 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PAX9P55771 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PAX9P55771 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
PAX9P55771 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PAX9P55771 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PAX9P55771 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.27■□□□□ 0.35
PAX9P55771 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.27■□□□□ 0.35
PAX9P55771 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PAX9P55771 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 FEM1AP1-201ENST00000431297 1995 ntBASIC17.26■□□□□ 0.35
PAX9P55771 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.26■□□□□ 0.35
PAX9P55771 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.26■□□□□ 0.35
PAX9P55771 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.26■□□□□ 0.35
PAX9P55771 MIR4508-201ENST00000584178 70 ntBASIC17.26■□□□□ 0.35
PAX9P55771 AC137630.3-201ENST00000607245 391 ntBASIC17.26■□□□□ 0.35
PAX9P55771 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PAX9P55771 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.25■□□□□ 0.35
PAX9P55771 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PAX9P55771 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.25■□□□□ 0.35
PAX9P55771 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.25■□□□□ 0.35
PAX9P55771 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.25■□□□□ 0.35
PAX9P55771 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PAX9P55771 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.25■□□□□ 0.35
PAX9P55771 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PAX9P55771 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PAX9P55771 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PAX9P55771 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.24■□□□□ 0.35
PAX9P55771 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PAX9P55771 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.24■□□□□ 0.35
PAX9P55771 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PAX9P55771 AC104564.3-201ENST00000582367 638 ntBASIC17.24■□□□□ 0.35
PAX9P55771 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.24■□□□□ 0.35
PAX9P55771 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.24■□□□□ 0.35
PAX9P55771 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.24■□□□□ 0.35
PAX9P55771 AC009102.2-201ENST00000606772 1639 ntBASIC17.24■□□□□ 0.35
PAX9P55771 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
PAX9P55771 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX9P55771 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PAX9P55771 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAX9P55771 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.23■□□□□ 0.35
PAX9P55771 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.23■□□□□ 0.35
PAX9P55771 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAX9P55771 C17orf82-201ENST00000623772 1530 ntBASIC17.23■□□□□ 0.35
PAX9P55771 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PAX9P55771 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAX9P55771 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.23■□□□□ 0.35
PAX9P55771 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms