Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MECP2P51608 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MECP2P51608 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
MECP2P51608 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.3■□□□□ 0.52
MECP2P51608 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.3■□□□□ 0.52
MECP2P51608 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.3■□□□□ 0.52
MECP2P51608 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 RNF165-205ENST00000588679 2904 ntBASIC18.3■□□□□ 0.52
MECP2P51608 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.3■□□□□ 0.52
MECP2P51608 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.3■□□□□ 0.52
MECP2P51608 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MECP2P51608 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MECP2P51608 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
MECP2P51608 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.29■□□□□ 0.52
MECP2P51608 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
MECP2P51608 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.29■□□□□ 0.52
MECP2P51608 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.29■□□□□ 0.52
MECP2P51608 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
MECP2P51608 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.29■□□□□ 0.52
MECP2P51608 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MECP2P51608 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.28■□□□□ 0.52
MECP2P51608 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.28■□□□□ 0.52
MECP2P51608 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.28■□□□□ 0.52
MECP2P51608 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.28■□□□□ 0.52
MECP2P51608 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.28■□□□□ 0.52
MECP2P51608 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MECP2P51608 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.27■□□□□ 0.52
MECP2P51608 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
MECP2P51608 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.27■□□□□ 0.52
MECP2P51608 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
MECP2P51608 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
MECP2P51608 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.27■□□□□ 0.52
MECP2P51608 DUX4L18-201ENST00000553347 1267 ntBASIC18.27■□□□□ 0.52
MECP2P51608 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MECP2P51608 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MECP2P51608 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
MECP2P51608 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MECP2P51608 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.26■□□□□ 0.51
MECP2P51608 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MECP2P51608 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 LINC01960-201ENST00000563759 1884 ntBASIC18.26■□□□□ 0.51
MECP2P51608 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 FEM1AP1-201ENST00000431297 1995 ntBASIC18.26■□□□□ 0.51
MECP2P51608 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MECP2P51608 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MECP2P51608 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MECP2P51608 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MECP2P51608 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.25■□□□□ 0.51
MECP2P51608 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MECP2P51608 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
MECP2P51608 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MECP2P51608 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MECP2P51608 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
MECP2P51608 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MECP2P51608 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
MECP2P51608 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms