Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	HMX1	YLR205C	954 nt		4.45	□□□□□ -1.7
CAF16	P43569	PGA3	YML125C	939 nt		4.45	□□□□□ -1.7
CAF16	P43569	YPL135C-A	YPL135C-A	174 nt		4.45	□□□□□ -1.7
CAF16	P43569	SUA7	YPR086W	1038 nt		4.45	□□□□□ -1.7
CAF16	P43569	HXT14	YNL318C	1623 nt		4.45	□□□□□ -1.7
CAF16	P43569	YPS7	YDR349C	1791 nt		4.45	□□□□□ -1.7
CAF16	P43569	YFL002W-B	YFL002W-B	1317 nt		4.45	□□□□□ -1.7
CAF16	P43569	YGR161W-A	YGR161W-A	1317 nt		4.45	□□□□□ -1.7
CAF16	P43569	YBL100W-A	YBL100W-A	1317 nt		4.45	□□□□□ -1.7
CAF16	P43569	YCL020W	YCL020W	1317 nt		4.45	□□□□□ -1.7
CAF16	P43569	SLY41	YOR307C	1362 nt		4.44	□□□□□ -1.7
CAF16	P43569	PIG2	YIL045W	1617 nt		4.44	□□□□□ -1.7
CAF16	P43569	YRA1	YDR381W	681 nt		4.44	□□□□□ -1.7
CAF16	P43569	MTC7	YEL033W	420 nt		4.44	□□□□□ -1.7
CAF16	P43569	CFD1	YIL003W	882 nt		4.44	□□□□□ -1.7
CAF16	P43569	YJR020W	YJR020W	333 nt		4.44	□□□□□ -1.7
CAF16	P43569	TUM1	YOR251C	915 nt		4.44	□□□□□ -1.7
CAF16	P43569	MRK1	YDL079C	1506 nt		4.44	□□□□□ -1.7
CAF16	P43569	TFB2	YPL122C	1542 nt		4.44	□□□□□ -1.7
CAF16	P43569	ROK1	YGL171W	1695 nt		4.44	□□□□□ -1.7
CAF16	P43569	YBR238C	YBR238C	2196 nt		4.44	□□□□□ -1.7
CAF16	P43569	YLR446W	YLR446W	1302 nt		4.44	□□□□□ -1.7
CAF16	P43569	SHE10	YGL228W	1734 nt		4.43	□□□□□ -1.7
CAF16	P43569	GCD1	YOR260W	1737 nt		4.43	□□□□□ -1.7
CAF16	P43569	LTV1	YKL143W	1392 nt		4.43	□□□□□ -1.7
CAF16	P43569	NOP6	YDL213C	678 nt		4.43	□□□□□ -1.7
CAF16	P43569	YFL064C	YFL064C	525 nt		4.43	□□□□□ -1.7
CAF16	P43569	YGR293C	YGR293C	462 nt		4.43	□□□□□ -1.7
CAF16	P43569	YHR182C-A	YHR182C-A	474 nt		4.43	□□□□□ -1.7
CAF16	P43569	IRC21	YMR073C	606 nt		4.43	□□□□□ -1.7
CAF16	P43569	GAL7	YBR018C	1101 nt		4.43	□□□□□ -1.7
CAF16	P43569	PWR1	PWR1	941 nt		4.43	□□□□□ -1.7
CAF16	P43569	YBR300C	YBR300C	498 nt		4.43	□□□□□ -1.7
CAF16	P43569	OPT2	YPR194C	2634 nt		4.43	□□□□□ -1.7
CAF16	P43569	GIP4	YAL031C	2283 nt		4.43	□□□□□ -1.7
CAF16	P43569	YBL005W-A	YBL005W-A	1323 nt		4.43	□□□□□ -1.7
CAF16	P43569	ESA1	YOR244W	1338 nt		4.43	□□□□□ -1.7
CAF16	P43569	SRP1	YNL189W	1629 nt		4.43	□□□□□ -1.7
CAF16	P43569	WHI3	YNL197C	1986 nt		4.42	□□□□□ -1.7
CAF16	P43569	PDR10	YOR328W	4695 nt		4.42	□□□□□ -1.7
CAF16	P43569	DFM1	YDR411C	1026 nt		4.42	□□□□□ -1.7
CAF16	P43569	SPO73	YER046W	432 nt		4.42	□□□□□ -1.7
CAF16	P43569	YGR114C	YGR114C	390 nt		4.42	□□□□□ -1.7
CAF16	P43569	PTI1	YGR156W	1278 nt		4.42	□□□□□ -1.7
CAF16	P43569	ATG27	YJL178C	816 nt		4.42	□□□□□ -1.7
CAF16	P43569	YJR012C	YJR012C	624 nt		4.42	□□□□□ -1.7
CAF16	P43569	RDN58-1	RDN58-1	158 nt		4.42	□□□□□ -1.7
CAF16	P43569	RDN58-2	RDN58-2	158 nt		4.42	□□□□□ -1.7
CAF16	P43569	ATP11	YNL315C	957 nt		4.42	□□□□□ -1.7
CAF16	P43569	YER077C	YER077C	2067 nt		4.42	□□□□□ -1.7
CAF16	P43569	PRP31	YGR091W	1485 nt		4.42	□□□□□ -1.7
CAF16	P43569	KIN3	YAR018C	1308 nt		4.42	□□□□□ -1.7
CAF16	P43569	YCR108C	YCR108C	192 nt		4.41	□□□□□ -1.7
CAF16	P43569	GPP2	YER062C	753 nt		4.41	□□□□□ -1.7
CAF16	P43569	YHL049C	YHL049C	816 nt		4.41	□□□□□ -1.7
CAF16	P43569	YKL202W	YKL202W	582 nt		4.41	□□□□□ -1.7
CAF16	P43569	CDC42	YLR229C	576 nt		4.41	□□□□□ -1.7
CAF16	P43569	GMC2	YLR445W	567 nt		4.41	□□□□□ -1.7
CAF16	P43569	YOL013W-B	YOL013W-B	291 nt		4.41	□□□□□ -1.7
CAF16	P43569	MET31	YPL038W	534 nt		4.41	□□□□□ -1.7
CAF16	P43569	YDR170W-A	YDR170W-A	1323 nt		4.41	□□□□□ -1.7
CAF16	P43569	SLF1	YDR515W	1344 nt		4.41	□□□□□ -1.7
CAF16	P43569	YMR046C	YMR046C	1323 nt		4.41	□□□□□ -1.7
CAF16	P43569	MNR2	YKL064W	2910 nt		4.41	□□□□□ -1.7
CAF16	P43569	MSM1	YGR171C	1728 nt		4.41	□□□□□ -1.7
CAF16	P43569	ROT2	YBR229C	2865 nt		4.4	□□□□□ -1.7
CAF16	P43569	PUF3	YLL013C	2640 nt		4.4	□□□□□ -1.7
CAF16	P43569	SLC1	YDL052C	912 nt		4.4	□□□□□ -1.71
CAF16	P43569	DIG2	YDR480W	972 nt		4.4	□□□□□ -1.71
CAF16	P43569	PMI40	YER003C	1290 nt		4.4	□□□□□ -1.71
CAF16	P43569	FAU1	YER183C	636 nt		4.4	□□□□□ -1.71
CAF16	P43569	YGL188C	YGL188C	174 nt		4.4	□□□□□ -1.71
CAF16	P43569	YJR141W	YJR141W	1044 nt		4.4	□□□□□ -1.71
CAF16	P43569	YKR011C	YKR011C	1062 nt		4.4	□□□□□ -1.71
CAF16	P43569	YOR387C	YOR387C	621 nt		4.4	□□□□□ -1.71
CAF16	P43569	YPR172W	YPR172W	603 nt		4.4	□□□□□ -1.71
CAF16	P43569	MRH4	YGL064C	1686 nt		4.4	□□□□□ -1.71
CAF16	P43569	THI20	YOL055C	1656 nt		4.4	□□□□□ -1.71
CAF16	P43569	YMR196W	YMR196W	3267 nt		4.4	□□□□□ -1.71
CAF16	P43569	GSY1	YFR015C	2127 nt		4.4	□□□□□ -1.71
CAF16	P43569	PAN1	YIR006C	4443 nt		4.4	□□□□□ -1.71
CAF16	P43569	PRR1	YKL116C	1557 nt		4.4	□□□□□ -1.71
CAF16	P43569	MFB1	YDR219C	1398 nt		4.4	□□□□□ -1.71
CAF16	P43569	MSH1	YHR120W	2880 nt		4.39	□□□□□ -1.71
CAF16	P43569	MPS3	YJL019W	2049 nt		4.39	□□□□□ -1.71
CAF16	P43569	CTT1	YGR088W	1689 nt		4.39	□□□□□ -1.71
CAF16	P43569	VPS17	YOR132W	1656 nt		4.39	□□□□□ -1.71
CAF16	P43569	YEL045C	YEL045C	426 nt		4.39	□□□□□ -1.71
CAF16	P43569	YGR126W	YGR126W	693 nt		4.39	□□□□□ -1.71
CAF16	P43569	YHI9	YHR029C	885 nt		4.39	□□□□□ -1.71
CAF16	P43569	AIM25	YJR100C	984 nt		4.39	□□□□□ -1.71
CAF16	P43569	RUF22	RUF22	515 nt		4.39	□□□□□ -1.71
CAF16	P43569	TRM10	YOL093W	882 nt		4.39	□□□□□ -1.71
CAF16	P43569	RPL21B	YPL079W	483 nt		4.39	□□□□□ -1.71
CAF16	P43569	EMP47	YFL048C	1338 nt		4.39	□□□□□ -1.71
CAF16	P43569	PUB1	YNL016W	1362 nt		4.39	□□□□□ -1.71
CAF16	P43569	TIF4632	YGL049C	2745 nt		4.38	□□□□□ -1.71
CAF16	P43569	PRP28	YDR243C	1767 nt		4.38	□□□□□ -1.71
CAF16	P43569	BTT1	YDR252W	450 nt		4.38	□□□□□ -1.71
CAF16	P43569	RSM28	YDR494W	1086 nt		4.38	□□□□□ -1.71

Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms