Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL5A2P05997 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC28.77■■■□□ 2.2
COL5A2P05997 AC093787.1-201ENST00000450396 207 ntBASIC28.77■■■□□ 2.2
COL5A2P05997 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.77■■■□□ 2.2
COL5A2P05997 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.77■■■□□ 2.2
COL5A2P05997 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.77■■■□□ 2.2
COL5A2P05997 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.76■■■□□ 2.2
COL5A2P05997 LINC01124-201ENST00000409786 2117 ntBASIC28.76■■■□□ 2.2
COL5A2P05997 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL5A2P05997 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC28.76■■■□□ 2.19
COL5A2P05997 NAA20-201ENST00000310450 920 ntTSL 2 BASIC28.76■■■□□ 2.19
COL5A2P05997 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC28.76■■■□□ 2.19
COL5A2P05997 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL5A2P05997 TERF1P5-201ENST00000477545 1207 ntBASIC28.76■■■□□ 2.19
COL5A2P05997 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL5A2P05997 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
COL5A2P05997 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL5A2P05997 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
COL5A2P05997 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL5A2P05997 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL5A2P05997 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL5A2P05997 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL5A2P05997 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL5A2P05997 BET1L-204ENST00000410108 637 ntTSL 3 BASIC28.74■■■□□ 2.19
COL5A2P05997 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC28.74■■■□□ 2.19
COL5A2P05997 EEF1DP3-203ENST00000566025 782 ntBASIC28.74■■■□□ 2.19
COL5A2P05997 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL5A2P05997 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.74■■■□□ 2.19
COL5A2P05997 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC28.74■■■□□ 2.19
COL5A2P05997 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL5A2P05997 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.73■■■□□ 2.19
COL5A2P05997 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.73■■■□□ 2.19
COL5A2P05997 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28.73■■■□□ 2.19
COL5A2P05997 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.73■■■□□ 2.19
COL5A2P05997 MYC-209ENST00000641252 345 ntBASIC28.73■■■□□ 2.19
COL5A2P05997 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
COL5A2P05997 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
COL5A2P05997 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.73■■■□□ 2.19
COL5A2P05997 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL5A2P05997 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
COL5A2P05997 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC28.72■■■□□ 2.19
COL5A2P05997 AC016405.3-201ENST00000607710 860 ntBASIC28.72■■■□□ 2.19
COL5A2P05997 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL5A2P05997 OR10C1-204ENST00000622521 1039 ntBASIC28.72■■■□□ 2.19
COL5A2P05997 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL5A2P05997 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
COL5A2P05997 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC28.72■■■□□ 2.19
COL5A2P05997 ABCB10P4-201ENST00000566803 2184 ntBASIC28.72■■■□□ 2.19
COL5A2P05997 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.72■■■□□ 2.19
COL5A2P05997 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC28.72■■■□□ 2.19
COL5A2P05997 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
COL5A2P05997 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.71■■■□□ 2.19
COL5A2P05997 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.71■■■□□ 2.19
COL5A2P05997 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.71■■■□□ 2.19
COL5A2P05997 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.71■■■□□ 2.19
COL5A2P05997 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC28.71■■■□□ 2.19
COL5A2P05997 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC28.71■■■□□ 2.19
COL5A2P05997 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
COL5A2P05997 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC28.71■■■□□ 2.19
COL5A2P05997 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.71■■■□□ 2.19
COL5A2P05997 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
COL5A2P05997 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.7■■■□□ 2.19
COL5A2P05997 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.19
COL5A2P05997 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
COL5A2P05997 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL5A2P05997 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL5A2P05997 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
COL5A2P05997 GCSHP5-201ENST00000443090 522 ntBASIC28.7■■■□□ 2.18
COL5A2P05997 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.18
COL5A2P05997 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
COL5A2P05997 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
COL5A2P05997 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.69■■■□□ 2.18
COL5A2P05997 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
COL5A2P05997 ADM-205ENST00000528544 586 ntTSL 2 BASIC28.69■■■□□ 2.18
COL5A2P05997 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.69■■■□□ 2.18
COL5A2P05997 ARL16-209ENST00000573715 763 ntTSL 3 BASIC28.69■■■□□ 2.18
COL5A2P05997 ARL16-211ENST00000576135 694 ntTSL 3 BASIC28.69■■■□□ 2.18
COL5A2P05997 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
COL5A2P05997 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL5A2P05997 AP004607.7-201ENST00000527152 1677 ntBASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms